Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyASF1-like8055363 3002057 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCore histone-like8042439 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANAPe6o22A1 A: a+b two layersX: NAP-like (From Topology)H: NAP-like (From Topology)T: NAP-likeF: NAPECOD (1.6)
BNAPe6o22B1 A: a+b two layersX: NAP-like (From Topology)H: NAP-like (From Topology)T: NAP-likeF: NAPECOD (1.6)
CHAT_KAT11e6o22C1 A: a+b three layersX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat) (From Topology)T: Acyl-CoA N-acyltransferases (Nat)F: HAT_KAT11ECOD (1.6)
DASF1_hist_chape6o22D1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: ASF1_hist_chapECOD (1.6)
EHistonee6o22E1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
FHistone_1e6o22F1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.1490 Mainly Beta Sandwich Immunoglobulin-like Histone chaperone ASF1-likeCATH (utative)
E1.10.20.10 Mainly Alpha Orthogonal Bundle Histone, subunit A Histone, subunit ACATH (utative)
F1.10.20.10 Mainly Alpha Orthogonal Bundle Histone, subunit A Histone, subunit ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00956Nucleosome assembly protein (NAP) (NAP)Nucleosome assembly protein (NAP)- Family
PF08214Histone acetylation protein (HAT_KAT11)Histone acetylation proteinHistone acetylation is required in many cellular processes including transcription, DNA repair, and chromatin assembly. This family contains the fungal KAT11 protein (previously known as RTT109) which is required for H3K56 acetylation. Loss of KAT11 ...Histone acetylation is required in many cellular processes including transcription, DNA repair, and chromatin assembly. This family contains the fungal KAT11 protein (previously known as RTT109) which is required for H3K56 acetylation. Loss of KAT11 results in the loss of H3K56 acetylation, both on bulk histone and on chromatin [1]. KAT11 and H3K56 acetylation appear to correlate with actively transcribed genes and associate with the elongating form of Pol II in yeast [1]. This family also incorporates the p300/CBP histone acetyltransferase domain which has different catalytic properties and cofactor regulation to KAT11 [3].
Domain
PF04729ASF1 like histone chaperone (ASF1_hist_chap)ASF1 like histone chaperone- Family
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Vacuolar protein sorting-associated protein 75
Histone acetyltransferase RTT109
Histone chaperone ASF1
Histone H3.2 -
Histone H4 -