6NU3

Structural insights into unique features of the human mitochondrial ribosome recycling


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like8072072 3000433 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L178033689 3000995 SCOP2B (2022-06-29)
Z [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins8075050 3001320 SCOP2B (2022-06-29)
CA [auth 4]SCOP2B SuperfamilyRibosomal protein L368083324 3001346 SCOP2B (2022-06-29)
HA [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like8053893 3002240 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyRibosomal protein L48080706 3001146 SCOP2B (2022-06-29)
DB [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063850 3001397 SCOP2B (2022-06-29)
KB [auth AI]SCOP2B SuperfamilyTranslational machinery components8098948 3000571 SCOP2B (2022-06-29)
LB [auth AJ]SCOP2B SuperfamilyNucleic acid-binding proteins8095431 3000135 SCOP2B (2022-06-29)
MB [auth AK]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052599 3000068 SCOP2B (2022-06-29)
SB [auth AQ]SCOP2B SuperfamilyRibosomal protein S218053089 3002159 SCOP2B (2022-06-29)
TB [auth AR]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like8051932 3002074 SCOP2B (2022-06-29)
AC [auth AY]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like8090914 3002471 SCOP2B (2022-06-29)
CC [auth A0]SCOP2 FamilyMitochondrial 28S ribosomal protein S34-like8093765 4004136 SCOP2 (2022-06-29)
CC [auth A0]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8093766 3000334 SCOP2 (2022-06-29)
I [auth K]SCOP2B SuperfamilyRibosomal protein L138100460 3001134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth L]PF00238e6nu3L1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
K [auth M]PF00828e6nu3M1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
L [auth N]PF00252e6nu3N1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
M [auth O]PF01196e6nu3O1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
N [auth P]PF00861e6nu3P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
O [auth Q]PF01245e6nu3Q1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
Q [auth S]PF00829e6nu3S1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
R [auth T]PF00237e6nu3T1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
S [auth U]PF00276e6nu3U1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
T [auth V]PF00467,PF17136e6nu3V1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
U [auth W]PF01016e6nu3W1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
V [auth X]PF00830e6nu3X1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
W [auth Y]PF06984e6nu3Y1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
X [auth Z]PF00327e6nu3Z1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
Y [auth 0]PF01783e6nu301 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
Z [auth 1]PF00471e6nu311 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
AA [auth 2]PF00468e6nu321 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
CA [auth 4]PF00444e6nu341 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
C [auth D]PF00181e6nu3D1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
C [auth D]PF03947e6nu3D2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
DA [auth 5]PF07147e6nu351 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
EA [auth 6]PF01161e6nu361 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
GA [auth 8]PF09812e6nu381 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: PF09812ECOD (1.6)
HA [auth 9]PF09809e6nu391 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
IA [auth a]PF10210e6nu3a1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: PF10210ECOD (1.6)
JA [auth b]PF05047e6nu3b1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
KA [auth c]PF22935e6nu3c1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF22935ECOD (1.6)
KA [auth c]PF22892e6nu3c2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF22892ECOD (1.6)
LA [auth d]PF04280e6nu3d1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF04280ECOD (1.6)
MA [auth e]PF11788e6nu3e1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
D [auth E]PF00297e6nu3E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
NA [auth f]PF00338e6nu3f1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
OA [auth g]PF05046e6nu3g1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
QA [auth i]PF10244e6nu3i1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: PF10244ECOD (1.6)
RA [auth j]PF18699e6nu3j1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: PF18699ECOD (1.6)
SA [auth k]PF10780e6nu3k1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF10780ECOD (1.6)
UA [auth m]PF09776e6nu3m1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF09776ECOD (1.6)
VA [auth o]PF14978e6nu3o1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: PF14978ECOD (1.6)
WA [auth p]PF00472e6nu3p1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
XA [auth q]PF10147e6nu3q1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: PF10147ECOD (1.6)
YA [auth r]PF01084e6nu3r1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
ZA [auth s]PF07147e6nu3s1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
DB [auth AB]PF00318e6nu3AB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
EB [auth AC]PF14955e6nu3AC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF14955ECOD (1.6)
FB [auth AD]PF03719e6nu3AD3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
FB [auth AD]PF00333e6nu3AD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
FB [auth AD]PF21251e6nu3AD2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF21251ECOD (1.6)
GB [auth AE]PF01250e6nu3AE1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
F [auth H]PF01281e6nu3H1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
HB [auth AF]PF00177e6nu3AF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
IB [auth AG]PF00380e6nu3AG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
JB [auth AH]PF00338e6nu3AH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
KB [auth AI]PF00411e6nu3AI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
LB [auth AJ]PF00164e6nu3AJ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
MB [auth AK]PF00253e6nu3AK1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
NB [auth AL]PF00312e6nu3AL1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
OB [auth AM]PF00886e6nu3AM1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
PB [auth AN]PF00366e6nu3AN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
QB [auth AO]PF01084e6nu3AO1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
G [auth I]PF00466e6nu3I1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
RB [auth AP]PF01084e6nu3AP1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
SB [auth AQ]PF01165e6nu3AQ1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
TB [auth AR]PF10245e6nu3AR1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: PF10245ECOD (1.6)
UB [auth AS]PF10484e6nu3AS1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: PF10484ECOD (1.6)
VB [auth AT]PF05047e6nu3AT1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
WB [auth AU]PF14943e6nu3AU1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: PF14943ECOD (1.6)
XB [auth AV]PF10037e6nu3AV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF10037ECOD (1.6)
YB [auth AW]PF10246e6nu3AW1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF10246ECOD (1.6)
ZB [auth AX]PF10236e6nu3AX1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF10236ECOD (1.6)
AC [auth AY]PF15433e6nu3AY1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: PF15433ECOD (1.6)
H [auth J]PF00298e6nu3J1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
H [auth J]PF03946e6nu3J2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
BC [auth AZ]PF08293e6nu3AZ1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: PF08293ECOD (1.6)
CC [auth A0]PF16053e6nu3A01 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: PF16053ECOD (1.6)
DC [auth A1]PF10213e6nu3A11 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF10213ECOD (1.6)
EC [auth A2]PF06747e6nu3A21 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
FC [auth A3]PF08213e6nu3A31 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: PF08213ECOD (1.6)
GC [auth A4]PF22330e6nu3A41 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF22330ECOD (1.6)
I [auth K]PF00572e6nu3K1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
K [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
L [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
M [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
N [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
O [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
Q [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
R [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
T [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth V]PF00467KOW motif (KOW)KOW motif- Family
U [auth W]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
V [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
W [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
X [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Y [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
Z [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
AA [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
BA [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
CA [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
C [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth D]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
EA [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
GA [auth 8]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family
HA [auth 9]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
IA [auth a]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
JA [auth b]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
LA [auth d]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
MA [auth e]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
D [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
NA [auth f]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
OA [auth g]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
PA [auth h]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
QA [auth i]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
RA [auth j]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
SA [auth k]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
TA [auth l]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
UA [auth m]PF09776Mitochondrial ribosomal protein L55 (Mitoc_L55)Mitochondrial ribosomal protein L55- Family
VA [auth o]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
E [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
XA [auth q]PF10147Growth arrest and DNA-damage-inducible proteins-interacting protein 1 (CR6_interact)Growth arrest and DNA-damage-inducible proteins-interacting protein 1- Family
YA [auth r]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
ZA [auth s]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
DB [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EB [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
FB [auth AD]PF2125140S ribosomal protein rpS2 (S5p), N-terminal (S5p_N)40S ribosomal protein rpS2 (S5p), N-terminalThis entry represents an extension found at the N-terminal of mammalian 28S ribosomal protein S5 [1,2]. This lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].Domain
FB [auth AD]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
FB [auth AD]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
GB [auth AE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
F [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
HB [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
IB [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JB [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
KB [auth AI]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
LB [auth AJ]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
MB [auth AK]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
NB [auth AL]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
OB [auth AM]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PB [auth AN]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
QB [auth AO]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
G [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
RB [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
SB [auth AQ]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
TB [auth AR]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
UB [auth AS]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
VB [auth AT]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
WB [auth AU]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
XB [auth AV]PF10037Mitochondrial 28S ribosomal protein S27 (MRP-S27)Mitochondrial 28S ribosomal protein S27- Repeat
YB [auth AW]PF10246Mitochondrial ribosomal protein MRP-S35 (MRP-S35)Mitochondrial ribosomal protein MRP-S35- Family
ZB [auth AX]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
AC [auth AY]PF15433Mitochondrial 28S ribosomal protein S31 (MRP-S31)Mitochondrial 28S ribosomal protein S31- Family
H [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
H [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
BC [auth AZ]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
CC [auth A0]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
DC [auth A1]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
EC [auth A2]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
FC [auth A3]PF08213Mitochondrial mRNA-processing protein COX24, C-terminal (COX24_C)Mitochondrial mRNA-processing protein COX24, C-terminalThis domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is ...This domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is a component of the mitochondrial ribosome (mitoribosome), responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane [2,3]. This domain is also found in COX24 mammalian homologue Aurora kinase A-interacting protein [4]. This entry also includes uncharacterised proteins from bacteria.
Domain
GC [auth A4]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
I [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
16S rRNA---
J [auth L]39S ribosomal protein L14, mitochondrial
K [auth M]39S ribosomal protein L15, mitochondrial
L [auth N]39S ribosomal protein L16, mitochondrial
M [auth O]39S ribosomal protein L17, mitochondrial
N [auth P]39S ribosomal protein L18, mitochondrial
O [auth Q]39S ribosomal protein L19, mitochondrial
P [auth R]39S ribosomal protein L20, mitochondrial
Q [auth S]39S ribosomal protein L21, mitochondrial
R [auth T]39S ribosomal protein L22, mitochondrial
S [auth U]39S ribosomal protein L23, mitochondrial
mt-tRNAVal---
T [auth V]39S ribosomal protein L24, mitochondrial
U [auth W]39S ribosomal protein L27, mitochondrial
V [auth X]39S ribosomal protein L28, mitochondrial
W [auth Y]39S ribosomal protein L47, mitochondrial
X [auth Z]39S ribosomal protein L30, mitochondrial
Y [auth 0]39S ribosomal protein L32, mitochondrial
Z [auth 1]39S ribosomal protein L33, mitochondrial
AA [auth 2]39S ribosomal protein L34, mitochondrial
BA [auth 3]39S ribosomal protein L35, mitochondrial
CA [auth 4]39S ribosomal protein L36, mitochondrial
C [auth D]39S ribosomal protein L2, mitochondrial
DA [auth 5]39S ribosomal protein L37, mitochondrial
EA [auth 6]39S ribosomal protein L38, mitochondrial-
FA [auth 7]39S ribosomal protein L39, mitochondrial
GA [auth 8]39S ribosomal protein L40, mitochondrial
HA [auth 9]39S ribosomal protein L41, mitochondrial
IA [auth a]39S ribosomal protein L42, mitochondrial
JA [auth b]39S ribosomal protein L43, mitochondrial
KA [auth c]39S ribosomal protein L44, mitochondrial
LA [auth d]cDNA FLJ61100, highly similar to 39S ribosomal protein L45, mitochondrial
MA [auth e]39S ribosomal protein L46, mitochondrial
D [auth E]39S ribosomal protein L3, mitochondrial
NA [auth f]39S ribosomal protein L48, mitochondrial-
OA [auth g]39S ribosomal protein L49, mitochondrial
PA [auth h]39S ribosomal protein L50, mitochondrial-
QA [auth i]39S ribosomal protein L51, mitochondrial
RA [auth j]39S ribosomal protein L52, mitochondrial
SA [auth k]39S ribosomal protein L53, mitochondrial-
TA [auth l]39S ribosomal protein L54, mitochondrial
UA [auth m]39S ribosomal protein L55, mitochondrial
VA [auth o]Ribosomal protein 63, mitochondrial
WA [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
E [auth F]39S ribosomal protein L4, mitochondrial
XA [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
YA [auth r]39S ribosomal protein S18a, mitochondrial
ZA [auth s]39S ribosomal protein S30, mitochondrial
AB [auth t]Unknown protein/protein extension---
BB [auth u]E-site tRNA---
CB [auth AA]12S rRNA---
DB [auth AB]28S ribosomal protein S2, mitochondrial
EB [auth AC]28S ribosomal protein S24, mitochondrial
FB [auth AD]28S ribosomal protein S5, mitochondrial
GB [auth AE]28S ribosomal protein S6, mitochondrial
F [auth H]39S ribosomal protein L9, mitochondrial
HB [auth AF]28S ribosomal protein S7, mitochondrial
IB [auth AG]28S ribosomal protein S9, mitochondrial
JB [auth AH]28S ribosomal protein S10, mitochondrial-
KB [auth AI]28S ribosomal protein S11, mitochondrial
LB [auth AJ]28S ribosomal protein S12, mitochondrial
MB [auth AK]28S ribosomal protein S14, mitochondrial
NB [auth AL]28S ribosomal protein S15, mitochondrial
OB [auth AM]28S ribosomal protein S16, mitochondrial
PB [auth AN]28S ribosomal protein S17, mitochondrial
QB [auth AO]28S ribosomal protein S18b, mitochondrial
G [auth I]39S ribosomal protein L10, mitochondrial
RB [auth AP]28S ribosomal protein S18c, mitochondrial
SB [auth AQ]28S ribosomal protein S21, mitochondrial
TB [auth AR]28S ribosomal protein S22, mitochondrial
UB [auth AS]28S ribosomal protein S23, mitochondrial
VB [auth AT]28S ribosomal protein S25, mitochondrial
WB [auth AU]28S ribosomal protein S26, mitochondrial
XB [auth AV]28S ribosomal protein S27, mitochondrial
YB [auth AW]28S ribosomal protein S28, mitochondrial
ZB [auth AX]28S ribosomal protein S29, mitochondrial
AC [auth AY]28S ribosomal protein S31, mitochondrial
H [auth J]39S ribosomal protein L11, mitochondrial
BC [auth AZ]28S ribosomal protein S33, mitochondrial
CC [auth A0]28S ribosomal protein S34, mitochondrial -
DC [auth A1]28S ribosomal protein S35, mitochondrial
EC [auth A2]Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
FC [auth A3]Aurora kinase A-interacting protein-
GC [auth A4]Pentatricopeptide repeat domain-containing protein 3, mitochondrial,mS39
I [auth K]39S ribosomal protein L13, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth L]IPR000218Large ribosomal subunit protein uL14Family
K [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth M]IPR030878Large ribosomal subunit protein uL15Family
K [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth N]IPR047873Large ribosomal subunit protein uL16Family
M [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth O]IPR000456Large ribosomal subunit protein bL17Family
N [auth P]IPR005484Large ribosomal subunit protein uL18Family
N [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth Q]IPR001857Large ribosomal subunit protein bL19Family
O [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth R]IPR005813Large ribosomal subunit protein bL20Family
Q [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth S]IPR001787Large ribosomal subunit protein bL21Family
Q [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
R [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth T]IPR001063Large ribosomal subunit protein uL22Family
S [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth V]IPR003256Large ribosomal subunit protein uL24Family
T [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth V]IPR005824KOWDomain
T [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth W]IPR001684Large ribosomal subunit protein bL27Family
V [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
V [auth X]IPR026569Large ribosomal subunit protein bL28Family
V [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
W [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
W [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
X [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
X [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Y [auth 0]IPR002677Large ribosomal subunit protein bL32Family
Y [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth 1]IPR001705Large ribosomal subunit protein bL33Family
AA [auth 2]IPR000271Large ribosomal subunit protein bL34Family
BA [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
BA [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CA [auth 4]IPR000473Large ribosomal subunit protein bL36Family
CA [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
C [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth D]IPR002171Large ribosomal subunit protein uL2Family
DA [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
EA [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
EA [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
EA [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
FA [auth 7]IPR012676TGS-likeHomologous Superfamily
FA [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
FA [auth 7]IPR004095TGSDomain
FA [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
GA [auth 8]IPR019192Large ribosomal subunit protein mL40Family
GA [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
HA [auth 9]IPR019189Large ribosomal subunit protein mL41Family
IA [auth a]IPR019346Large ribosomal subunit protein mL42Family
JA [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth b]IPR039927Large ribosomal subunit protein mL43Family
KA [auth c]IPR011907Ribonuclease IIIFamily
KA [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
KA [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
KA [auth c]IPR014720Double-stranded RNA-binding domainDomain
LA [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
LA [auth d]IPR007379Tim44-like domainDomain
MA [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
MA [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
MA [auth e]IPR040008Large ribosomal subunit protein mL46Family
MA [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
D [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth E]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth E]IPR000597Large ribosomal subunit protein uL3Family
NA [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth f]IPR027487Large ribosomal subunit protein mL48Family
NA [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth g]IPR007740Large ribosomal subunit protein mL49Family
PA [auth h]IPR018305Large ribosomal subunit protein mL50Family
QA [auth i]IPR019373Large ribosomal subunit protein mL51Family
RA [auth j]IPR034596Large ribosomal subunit protein mL52Family
SA [auth k]IPR019716Large ribosomal subunit protein mL53Family
TA [auth l]IPR013870Large ribosomal subunit protein mL54Family
UA [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
UA [auth m]IPR018615Large ribosomal subunit protein mL55Family
VA [auth o]IPR016576Large ribosomal subunit protein mL63Family
WA [auth p]IPR000352Peptide chain release factor class IDomain
E [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth F]IPR002136Large ribosomal subunit protein uL4Family
E [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
XA [auth q]IPR018472Large ribosomal subunit protein mL64Family
XA [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
YA [auth r]IPR001648Small ribosomal subunit protein bS18Family
YA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
ZA [auth s]IPR039982Large ribosomal subunit protein mL65Family
ZA [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
DB [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
DB [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
DB [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
DB [auth AB]IPR001865Small ribosomal subunit protein uS2Family
EB [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
FB [auth AD]IPR000851Small ribosomal subunit protein uS5Family
FB [auth AD]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
FB [auth AD]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
FB [auth AD]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
FB [auth AD]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FB [auth AD]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
FB [auth AD]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GB [auth AE]IPR000529Small ribosomal subunit protein bS6Family
GB [auth AE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
GB [auth AE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
F [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
F [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
F [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
F [auth H]IPR000244Large ribosomal subunit protein bL9Family
HB [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
HB [auth AF]IPR000235Small ribosomal subunit protein uS7Family
HB [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
IB [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IB [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IB [auth AG]IPR000754Small ribosomal subunit protein uS9Family
IB [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JB [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
JB [auth AH]IPR040055Small ribosomal subunit protein uS10mFamily
JB [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
KB [auth AI]IPR001971Small ribosomal subunit protein uS11Family
KB [auth AI]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KB [auth AI]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
LB [auth AJ]IPR006032Small ribosomal subunit protein uS12Family
LB [auth AJ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
LB [auth AJ]IPR005679Ribosomal protein uS12, bacterial-typeFamily
MB [auth AK]IPR001209Small ribosomal subunit protein uS14Family
NB [auth AL]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
NB [auth AL]IPR000589Small ribosomal subunit protein uS15Family
NB [auth AL]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
OB [auth AM]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
OB [auth AM]IPR000307Small ribosomal subunit protein bS16Family
PB [auth AN]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
PB [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PB [auth AN]IPR000266Small ribosomal subunit protein uS17Family
QB [auth AO]IPR040054Small ribosomal subunit protein mS40Family
QB [auth AO]IPR001648Small ribosomal subunit protein bS18Family
QB [auth AO]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
G [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
G [auth I]IPR001790Large ribosomal subunit protein uL10Family
G [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
RB [auth AP]IPR001648Small ribosomal subunit protein bS18Family
RB [auth AP]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RB [auth AP]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SB [auth AQ]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
SB [auth AQ]IPR001911Small ribosomal subunit protein bS21Family
TB [auth AR]IPR019374Small ribosomal subunit protein mS22Family
UB [auth AS]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
UB [auth AS]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
VB [auth AT]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
VB [auth AT]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
VB [auth AT]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
WB [auth AU]IPR026140Small ribosomal subunit protein mS26Family
XB [auth AV]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
XB [auth AV]IPR002885Pentatricopeptide repeatRepeat
XB [auth AV]IPR019266Small ribosomal subunit protein mS27Family
XB [auth AV]IPR034913mS27/PTCD2Family
YB [auth AW]IPR019375Small ribosomal subunit protein bS1mFamily
ZB [auth AX]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
ZB [auth AX]IPR019368Small ribosomal subunit protein mS29Family
ZB [auth AX]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
AC [auth AY]IPR026299Mitochondrial 28S ribosomal protein S31Family
H [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
H [auth J]IPR000911Ribosomal protein uL11Family
H [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
H [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
H [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
H [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
BC [auth AZ]IPR013219Small ribosomal subunit protein mS33Family
CC [auth A0]IPR032053Small ribosomal subunit protein mS34Family
DC [auth A1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
DC [auth A1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
EC [auth A2]IPR010625CHCHDomain
EC [auth A2]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
EC [auth A2]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
FC [auth A3]IPR013177Ribosomal protein mS38, C-terminalDomain
GC [auth A4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
GC [auth A4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
GC [auth A4]IPR002885Pentatricopeptide repeatRepeat
I [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth K]IPR005822Large ribosomal subunit protein uL13Family
I [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
J [auth L]PharosQ6P1L8
K [auth M]PharosQ9P015
L [auth N]PharosQ9NX20
M [auth O]PharosQ9NRX2
N [auth P]PharosQ9H0U6
O [auth Q]PharosP49406
P [auth R]PharosQ9BYC9
R [auth T]PharosQ9NWU5
S [auth U]PharosQ16540
T [auth V]PharosQ96A35
U [auth W]PharosQ9P0M9
V [auth X]PharosQ13084
W [auth Y]PharosQ9HD33
X [auth Z]PharosQ8TCC3
Y [auth 0]PharosQ9BYC8
Z [auth 1]PharosO75394
AA [auth 2]PharosQ9BQ48
BA [auth 3]PharosQ9NZE8
CA [auth 4]PharosQ9P0J6
C [auth D]PharosQ5T653
DA [auth 5]PharosQ9BZE1
FA [auth 7]PharosQ9NYK5
GA [auth 8]PharosQ9NQ50
HA [auth 9]PharosQ8IXM3
IA [auth a]PharosQ9Y6G3
JA [auth b]PharosQ8N983
KA [auth c]PharosQ9H9J2
LA [auth d]PharosQ9BRJ2
D [auth E]PharosP09001
NA [auth f]PharosQ96GC5
OA [auth g]PharosQ13405
PA [auth h]PharosQ8N5N7
QA [auth i]PharosQ4U2R6
RA [auth j]PharosQ86TS9
TA [auth l]PharosQ6P161
UA [auth m]PharosQ7Z7F7
VA [auth o]PharosQ9BQC6
WA [auth p]PharosQ14197
E [auth F]PharosQ9BYD3
XA [auth q]PharosQ8TAE8
YA [auth r]PharosQ9NVS2
ZA [auth s]PharosQ9NP92
DB [auth AB]PharosQ9Y399
FB [auth AD]PharosP82675
GB [auth AE]PharosP82932
F [auth H]PharosQ9BYD2
HB [auth AF]PharosQ9Y2R9
IB [auth AG]PharosP82933
JB [auth AH]PharosP82664
KB [auth AI]PharosP82912
LB [auth AJ]PharosO15235
MB [auth AK]PharosO60783
NB [auth AL]PharosP82914
OB [auth AM]PharosQ9Y3D3
PB [auth AN]PharosQ9Y2R5
QB [auth AO]PharosQ9Y676
G [auth I]PharosQ7Z7H8
RB [auth AP]PharosQ9Y3D5
SB [auth AQ]PharosP82921
TB [auth AR]PharosP82650
UB [auth AS]PharosQ9Y3D9
VB [auth AT]PharosP82663
XB [auth AV]PharosQ92552
YB [auth AW]PharosQ9Y2Q9
ZB [auth AX]PharosP51398
AC [auth AY]PharosQ92665
H [auth J]PharosQ9Y3B7
BC [auth AZ]PharosQ9Y291
DC [auth A1]PharosP82673
EC [auth A2]PharosQ96BP2
FC [auth A3]PharosQ9NWT8
GC [auth A4]PharosQ96EY7
I [auth K]PharosQ9BYD1