6LB3
Crystal structure of PA4674 in complex with its operator DNA (18bp) from Pseudomonas aeruginosa
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8100514 | 3000119 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HTH_3_3 | e6lb3A1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
B | HTH_3_3 | e6lb3B1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
C | HTH_3_3 | e6lb3C1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
D | HTH_3_3 | e6lb3D1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
E | HTH_3_3 | e6lb3E1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
F | HTH_3_3 | e6lb3F1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
G | HTH_3_3 | e6lb3G1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
H | HTH_3_3 | e6lb3H1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: HTH_3_3 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01381 | Helix-turn-helix (HTH_3) | Helix-turn-helix | This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
HTH cro/C1-type domain-containing protein | - | - | ||
DNA (5'-D(P*AP*CP*GP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*GP*GP*T)-3') | - | - | - | |
DNA (5'-D(P*AP*CP*CP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*CP*GP*T)-3') | - | - | - |