Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040294 3001831 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040292 3001831 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040294 3001831 SCOP2B (2022-06-29)
K [auth L]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040292 3001831 SCOP2B (2022-06-29)
GA [auth m]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like8095115 3000653 SCOP2B (2022-06-29)
U [auth a]SCOP2B SuperfamilyCytochrome c oxidase subunit I-like8095115 3000653 SCOP2B (2022-06-29)
IA [auth o]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like8095567 3000671 SCOP2B (2022-06-29)
W [auth c]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like8095567 3000671 SCOP2B (2022-06-29)
LA [auth r]SCOP2B SuperfamilyCytochrome c oxidase subunit E8095803 3001402 SCOP2B (2022-06-29)
Z [auth f]SCOP2B SuperfamilyCytochrome c oxidase subunit E8095803 3001402 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040297 3001831 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040300 3001831 SCOP2B (2022-06-29)
L [auth M]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040297 3001831 SCOP2B (2022-06-29)
L [auth M]SCOP2B SuperfamilyLuxS/MPP-like metallohydrolase8040300 3001831 SCOP2B (2022-06-29)
DA [auth j]SCOP2B SuperfamilyCytochrome c oxidase subunit h8095569 3000395 SCOP2B (2022-06-29)
PA [auth v]SCOP2B SuperfamilyCytochrome c oxidase subunit h8095569 3000395 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTransmembrane di-heme cytochromes8040302 3000517 SCOP2B (2022-06-29)
CSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040299 3000966 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyTransmembrane di-heme cytochromes8040302 3000517 SCOP2B (2022-06-29)
M [auth N]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040299 3000966 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCytochrome c8040304 3000815 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8040305 3000762 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyCytochrome c8040304 3000815 SCOP2B (2022-06-29)
N [auth O]SCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor8040305 3000762 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyISP transmembrane anchor8040308 3000753 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyISP domain8040307 3000233 SCOP2B (2022-06-29)
O [auth P]SCOP2B SuperfamilyISP domain8040307 3000233 SCOP2B (2022-06-29)
O [auth P]SCOP2B SuperfamilyISP transmembrane anchor8040308 3000753 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040312 3000806 SCOP2B (2022-06-29)
P [auth Q]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040312 3000806 SCOP2B (2022-06-29)
GSCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040315 3000797 SCOP2B (2022-06-29)
Q [auth R]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040315 3000797 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040318 3000770 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040318 3000770 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040319 3000779 SCOP2B (2022-06-29)
S [auth T]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8040319 3000779 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_M16_Ce6hu9A2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
APeptidase_M16e6hu9A1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
K [auth L]Peptidase_M16_Ce6hu9L1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
K [auth L]Peptidase_M16e6hu9L2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
JUNK_F_TYPEe6hu9J1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UNK_F_TYPEECOD (1.6)
T [auth U]UNK_F_TYPEe6hu9U1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UNK_F_TYPEECOD (1.6)
GA [auth m]COX1e6hu9m1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: COX1ECOD (1.6)
U [auth a]COX1e6hu9a1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: COX1ECOD (1.6)
HA [auth n]COX2e6hu9n1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: COX2ECOD (1.6)
HA [auth n]COX2_TMe6hu9n2 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: COX2_TMECOD (1.6)
V [auth b]COX2e6hu9b2 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: COX2ECOD (1.6)
V [auth b]COX2_TMe6hu9b1 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: COX2_TMECOD (1.6)
IA [auth o]COX3e6hu9o1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: COX3ECOD (1.6)
W [auth c]COX3e6hu9c1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: COX3ECOD (1.6)
JA [auth p]COX5Be6hu9p1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: COX5BECOD (1.6)
X [auth d]COX5Be6hu9d1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: COX5BECOD (1.6)
KA [auth q]COX4e6hu9q1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: COX4ECOD (1.6)
Y [auth e]COX4e6hu9e1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: COX4ECOD (1.6)
LA [auth r]COX5Ae6hu9r1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: COX5AECOD (1.6)
Z [auth f]COX5Ae6hu9f1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: COX5AECOD (1.6)
AA [auth g]UNK_F_TYPEe6hu9g1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: UNK_F_TYPEECOD (1.6)
MA [auth s]UNK_F_TYPEe6hu9s1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIaF: UNK_F_TYPEECOD (1.6)
BA [auth h]UNK_F_TYPEe6hu9h1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: UNK_F_TYPEECOD (1.6)
NA [auth t]UNK_F_TYPEe6hu9t1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: UNK_F_TYPEECOD (1.6)
BPeptidase_M16e6hu9B1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
BUNK_F_TYPEe6hu9B2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
L [auth M]Peptidase_M16e6hu9M2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
L [auth M]UNK_F_TYPEe6hu9M1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
DA [auth j]COX6Be6hu9j1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: COX6BECOD (1.6)
PA [auth v]COX6Be6hu9v1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: COX6BECOD (1.6)
EA [auth k]COX6Ae6hu9k1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: COX6AECOD (1.6)
QA [auth w]COX6Ae6hu9w1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: COX6AECOD (1.6)
CCytochrom_B_Ce6hu9C1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
CCytochrome_Be6hu9C2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
M [auth N]Cytochrom_B_Ce6hu9N2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
M [auth N]Cytochrome_Be6hu9N1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
DCytochrom_C1_Ne6hu9D1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
DCytochrom_C1_Ce6hu9D2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
N [auth O]Cytochrom_C1_Ne6hu9O1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
N [auth O]Cytochrom_C1_Ce6hu9O2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
ERieske_cytochrome_bc1e6hu9E2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
ERieske_6e6hu9E3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
EUCR_TMe6hu9E1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
O [auth P]Rieske_cytochrome_bc1e6hu9P3 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
O [auth P]Rieske_6e6hu9P1 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
O [auth P]UCR_TMe6hu9P2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
FUCR_hingee6hu9F1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
P [auth Q]UCR_hingee6hu9Q1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
GUCR_14kDe6hu9G1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
Q [auth R]UCR_14kDe6hu9R1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
HUcrQe6hu9H1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
R [auth S]UcrQe6hu9S1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
IUCR_UQCRX_QCR9e6hu9I1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
S [auth T]UCR_UQCRX_QCR9e6hu9T1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
K [auth L]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
GA [auth m]1.20.210.10 Mainly Alpha Up-down Bundle Cytochrome C Oxidase Chain ACATH (4.3.0)
U [auth a]1.20.210.10 Mainly Alpha Up-down Bundle Cytochrome C Oxidase Chain ACATH (4.3.0)
HA [auth n]1.10.287.90 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
HA [auth n]2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
V [auth b]1.10.287.90 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
V [auth b]2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
IA [auth o]1.10.287.70 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
IA [auth o]1.20.120.80 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Cytochrome c oxidase, subunit III, four-helix bundleCATH (4.3.0)
W [auth c]1.10.287.70 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
W [auth c]1.20.120.80 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Cytochrome c oxidase, subunit III, four-helix bundleCATH (4.3.0)
LA [auth r]1.25.40.40 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Cytochrome c oxidase, subunit Va/VICATH (4.3.0)
Z [auth f]1.25.40.40 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Cytochrome c oxidase, subunit Va/VICATH (4.3.0)
BA [auth h]4.10.49.10 Few Secondary Structures Irregular Cytochrome C Oxidase Chain LCATH (4.3.0)
NA [auth t]4.10.49.10 Few Secondary Structures Irregular Cytochrome C Oxidase Chain LCATH (4.3.0)
B3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
L [auth M]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
DA [auth j]1.10.10.140 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Cytochrome c oxidase, subunit VIbCATH (4.3.0)
PA [auth v]1.10.10.140 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Cytochrome c oxidase, subunit VIbCATH (4.3.0)
C1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
M [auth N]1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
D1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
D1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
N [auth O]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
N [auth O]1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
E1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
E2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
O [auth P]1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
O [auth P]2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
F1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
P [auth Q]1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
G1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
Q [auth R]1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
H1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
R [auth S]1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
I1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
S [auth T]1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
K [auth L]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A,
K [auth L]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
J,
T [auth U]
PF09796Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (QCR10)Ubiquinol-cytochrome-c reductase complex subunit (QCR10)- Family
GA [auth m],
U [auth a]
PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
HA [auth n],
V [auth b]
PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domain- Domain
HA [auth n],
V [auth b]
PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
IA [auth o],
W [auth c]
PF00510Cytochrome c oxidase subunit III (COX3)Cytochrome c oxidase subunit III- Family
JA [auth p],
X [auth d]
PF01215Cytochrome c oxidase subunit Vb (COX5B)Cytochrome c oxidase subunit Vb- Domain
KA [auth q],
Y [auth e]
PF02936Cytochrome c oxidase subunit IV (COX4)Cytochrome c oxidase subunit IV- Family
LA [auth r],
Z [auth f]
PF02284Cytochrome c oxidase subunit Va (COX5A)Cytochrome c oxidase subunit VaCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va.Domain
AA [auth g],
MA [auth s]
PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
BA [auth h],
NA [auth t]
PF02935Cytochrome c oxidase subunit VIIc (COX7C)Cytochrome c oxidase subunit VIIc- Family
B,
L [auth M]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
DA [auth j],
PA [auth v]
PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase.Domain
EA [auth k],
QA [auth w]
PF02046Cytochrome c oxidase subunit VIa (COX6A)Cytochrome c oxidase subunit VIa- Family
C,
M [auth N]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C,
M [auth N]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
D,
N [auth O]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E,
O [auth P]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E,
O [auth P]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
F,
P [auth Q]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
G,
Q [auth R]
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
H,
R [auth S]
PF02939UcrQ family (UcrQ)UcrQ family- Family
I,
S [auth T]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
K [auth L]
Cytochrome b-c1 complex subunit 1, mitochondrial
J,
T [auth U]
Cytochrome b-c1 complex subunit 10-
GA [auth m],
U [auth a]
Cytochrome c oxidase subunit 1
HA [auth n],
V [auth b]
Cytochrome c oxidase subunit 2
IA [auth o],
W [auth c]
Cytochrome c oxidase subunit 3
JA [auth p],
X [auth d]
Cytochrome c oxidase subunit 4, mitochondrial
KA [auth q],
Y [auth e]
Cytochrome c oxidase polypeptide 5A, mitochondrial
LA [auth r],
Z [auth f]
Cytochrome c oxidase subunit 6, mitochondrial
AA [auth g],
MA [auth s]
Cytochrome c oxidase subunit 7
BA [auth h],
NA [auth t]
Cytochrome c oxidase polypeptide VIII, mitochondrial
CA [auth i],
OA [auth u]
Cytochrome c oxidase subunit 7A
B,
L [auth M]
Cytochrome b-c1 complex subunit 2, mitochondrial
DA [auth j],
PA [auth v]
Cytochrome c oxidase subunit 6B
EA [auth k],
QA [auth w]
Cytochrome c oxidase subunit 6A, mitochondrial
FA [auth l],
RA [auth x]
Cox26- -
C,
M [auth N]
Cytochrome b
D,
N [auth O]
Cytochrome c1, heme protein, mitochondrial
E,
O [auth P]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F,
P [auth Q]
Cytochrome b-c1 complex subunit 6-
G,
Q [auth R]
Cytochrome b-c1 complex subunit 7-
H,
R [auth S]
Cytochrome b-c1 complex subunit 8-
I,
S [auth T]
Cytochrome b-c1 complex subunit 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
K [auth L]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth L]
IPR011765Peptidase M16, N-terminalDomain
J,
T [auth U]
IPR019182Cytochrome b-c1 complex subunit 10, fungiFamily
GA [auth m],
U [auth a]
IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
GA [auth m],
U [auth a]
IPR000883Cytochrome c oxidase subunit IFamily
GA [auth m],
U [auth a]
IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
GA [auth m],
U [auth a]
IPR023616Cytochrome c oxidase-like, subunit I domainDomain
GA [auth m],
U [auth a]
IPR033944Cytochrome c oxidase subunit I domainDomain
HA [auth n],
V [auth b]
IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
HA [auth n],
V [auth b]
IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
HA [auth n],
V [auth b]
IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
HA [auth n],
V [auth b]
IPR045187Cytochrome c/quinol oxidase subunit IIFamily
HA [auth n],
V [auth b]
IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
HA [auth n],
V [auth b]
IPR008972CupredoxinHomologous Superfamily
HA [auth n],
V [auth b]
IPR001505Copper centre Cu(A)Binding Site
HA [auth n],
V [auth b]
IPR014222Cytochrome c oxidase, subunit IIDomain
IA [auth o],
W [auth c]
IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
IA [auth o],
W [auth c]
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
IA [auth o],
W [auth c]
IPR000298Cytochrome c oxidase subunit III-likeDomain
IA [auth o],
W [auth c]
IPR033945Cytochrome c oxidase subunit III domainDomain
IA [auth o],
W [auth c]
IPR024791Cytochrome c oxidase subunit IIIFamily
JA [auth p],
X [auth d]
IPR002124Cytochrome c oxidase, subunit VbFamily
JA [auth p],
X [auth d]
IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
KA [auth q],
Y [auth e]
IPR004203Cytochrome c oxidase subunit IV familyFamily
KA [auth q],
Y [auth e]
IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
LA [auth r],
Z [auth f]
IPR003204Cytochrome c oxidase, subunit Va/VIFamily
LA [auth r],
Z [auth f]
IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
AA [auth g],
MA [auth s]
IPR014367Cytochrome c oxidase subunit VII, budding yeastFamily
AA [auth g],
MA [auth s]
IPR039297Cytochrome c oxidase subunit VIIFamily
BA [auth h],
NA [auth t]
IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
BA [auth h],
NA [auth t]
IPR004202Cytochrome c oxidase subunit VIIcFamily
CA [auth i],
OA [auth u]
IPR014368Cytochrome c oxidase, subunit VIIa, fungalFamily
B,
L [auth M]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
L [auth M]
IPR011765Peptidase M16, N-terminalDomain
B,
L [auth M]
IPR001431Peptidase M16, zinc-binding siteBinding Site
DA [auth j],
PA [auth v]
IPR036549Cytochrome c oxidase, subunit VIb superfamilyHomologous Superfamily
DA [auth j],
PA [auth v]
IPR048280Cytochrome oxidase c subunit VIb-likeFamily
DA [auth j],
PA [auth v]
IPR003213Cytochrome c oxidase, subunit VIbFamily
EA [auth k],
QA [auth w]
IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
EA [auth k],
QA [auth w]
IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
EA [auth k],
QA [auth w]
IPR001349Cytochrome c oxidase, subunit VIaFamily
C,
M [auth N]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth N]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth N]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR030689Cytochrome bFamily
C,
M [auth N]
IPR005797Cytochrome b/b6, N-terminal domainDomain
D,
N [auth O]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D,
N [auth O]
IPR002326Cytochrome c1Family
D,
N [auth O]
IPR009056Cytochrome c-like domainDomain
D,
N [auth O]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E,
O [auth P]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth P]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E,
O [auth P]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth P]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth P]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F,
P [auth Q]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
F,
P [auth Q]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
G,
Q [auth R]
IPR003197Cytochrome b-c1 complex subunit 7Family
G,
Q [auth R]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
H,
R [auth S]
IPR004205Cytochrome b-c1 complex subunit 8Family
H,
R [auth S]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
I,
S [auth T]
IPR008027Cytochrome b-c1 complex subunit 9Family
I,
S [auth T]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily