6E5U
Crystal structure of the mRNA export receptor NXF1/NXT1 in complex with influenza virus NS1 protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | L domain-like | 8038331 | 3001010 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | NTF2-like | 8037085 | 3000472 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | L domain-like | 8038331 | 3001010 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | NTF2-like | 8037085 | 3000472 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | L domain-like | 8038331 | 3001010 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | NTF2-like | 8037085 | 3000472 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | NTF2-like | 8037085 | 3000472 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | L domain-like | 8038331 | 3001010 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | NTF2-like | 8037084 | 3000472 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | NTF2-like | 8037084 | 3000472 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | NTF2-like | 8037084 | 3000472 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | NTF2-like | 8037084 | 3000472 | SCOP2B (2022-06-29) |
L [auth U] | SCOP2 Family | Ns1 effector domain-like | 8093809 | 4003394 | SCOP2 (2022-06-29) |
L [auth U] | SCOP2 Superfamily | Ns1 effector domain-like | 8093810 | 3000759 | SCOP2 (2022-06-29) |
M [auth V] | SCOP2B Superfamily | Ns1 effector domain-like | 8093810 | 3000759 | SCOP2B (2022-06-29) |
N [auth X] | SCOP2B Superfamily | Ns1 effector domain-like | 8093810 | 3000759 | SCOP2B (2022-06-29) |
O [auth Y] | SCOP2B Superfamily | Ns1 effector domain-like | 8093810 | 3000759 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LRR_9 | e6e5uA2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_9 | ECOD (1.6) |
A | NTF2_1 | e6e5uA1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2_1 | ECOD (1.6) |
C | LRR_9 | e6e5uC1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_9 | ECOD (1.6) |
C | NTF2_1 | e6e5uC2 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2_1 | ECOD (1.6) |
E | LRR_9 | e6e5uE1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_9 | ECOD (1.6) |
E | NTF2_1 | e6e5uE2 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2_1 | ECOD (1.6) |
G | LRR_9 | e6e5uG1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_9 | ECOD (1.6) |
G | NTF2_1 | e6e5uG2 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2_1 | ECOD (1.6) |
B | NTF2 | e6e5uB1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2 | ECOD (1.6) |
D | NTF2 | e6e5uD1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2 | ECOD (1.6) |
F | NTF2 | e6e5uF1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2 | ECOD (1.6) |
H | NTF2 | e6e5uH1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2 | ECOD (1.6) |
I [auth K] | Flu_NS1_N | e6e5uK1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Flu_NS1_N | ECOD (1.6) |
J [auth L] | Flu_NS1_N | e6e5uL1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Flu_NS1_N | ECOD (1.6) |
K [auth M] | Flu_NS1_N | e6e5uM1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Flu_NS1_N | ECOD (1.6) |
P [auth J] | Flu_NS1_N | e6e5uJ1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Flu_NS1_N | ECOD (1.6) |
L [auth U] | Flu_NS1_C | e6e5uU1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
M [auth V] | Flu_NS1_C | e6e5uV1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
N [auth X] | Flu_NS1_C | e6e5uX1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
O [auth Y] | Flu_NS1_C | e6e5uY1 | A: mixed a+b and a/b | X: Ns1 effector domain-like (From Topology) | H: Ns1 effector domain-like (From Topology) | T: Ns1 effector domain-like | F: Flu_NS1_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02136 | Nuclear transport factor 2 (NTF2) domain (NTF2) | Nuclear transport factor 2 (NTF2) domain | This family includes the NTF2-like Delta-5-3-ketosteroid isomerase proteins. | Domain | |
PF02136 | Nuclear transport factor 2 (NTF2) domain (NTF2) | Nuclear transport factor 2 (NTF2) domain | This family includes the NTF2-like Delta-5-3-ketosteroid isomerase proteins. | Domain | |
I [auth K], J [auth L], K [auth M], P [auth J] | PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family |
L [auth U], M [auth V], N [auth X], O [auth Y] | PF00600 | Influenza non-structural protein (NS1) (Flu_NS1) | Influenza non-structural protein (NS1) | - | Family |