6D7G
Structure of 5F3 TCR in complex with HLA-A2/MART-1
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth D] | d6d7gd1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth E] | d6d7ge2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | automated matches | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth E] | d6d7ge1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | C1-set_2 | e6d7gA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
A | MHC_I | e6d7gA3 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
B [auth D] | C1-set_1 | e6d7gD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
B [auth D] | V-set_4 | e6d7gD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_4 | ECOD (1.6) |
C [auth E] | C1-set_1 | e6d7gE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
C [auth E] | V-set_3 | e6d7gE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 3.30.500.10 | Alpha Beta | 2-Layer Sandwich | Murine Class I Major Histocompatibility Complex, H2-DB | Chain A, domain 1 | CATH (4.3.0) |
B [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth E] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
MH1 HLA-A2 | 1C-LIKE | Homo sapiens (human) | B2M*01, B2M*02, HLA-A*0219, HLA-A*0225, HLA-A*0227, HLA-A*0236, HLA-A*0237, HLA-A*0238, HLA-A*0239, HLA-A*0240, HLA-A*0249, HLA-A*0252, HLA-A*0271, HLA-A*0274, HLA-A*0258, HLA-A*0280, HLA-A*0286, HLA-A*0273, HLA-A*0285, HLA-A*0264, HLA-A*0275, HLA-A*0267, HLA-A*0295, HLA-A*0297, HLA-A*9201, HLA-A*0296, HLA-A*0293, HLA-A*9221, HLA-A*9231, HLA-A*9214, HLA-A*9202, HLA-A*9210, HLA-A*9205, HLA-A*9217, HLA-A*9211, HLA-A*9204, HLA-A*9230, HLA-A*9218, HLA-A*9247, HLA-A*9249, HLA-A*9251, HLA-A*9248, HLA-A*9256, HLA-A*9252, HLA-A*9240, HLA-A*9253, HLA-A*9245, HLA-A*9277, HLA-A*9257, HLA-A*9271, HLA-A*9294, HLA-A*9264, HLA-A*9290, HLA-A*9266, HLA-A*9291, HLA-A*9289, HLA-A*9274, HLA-A*9262, HLA-A*9259, HLA-A*9263, HLA-A*9268, HLA-A*9288, HLA-A*9293, HLA-A*9287, HLA-A*9283, HLA-A*9267, HLA-A*9265, HLA-A*9282, HLA-A*9297, HLA-A*9298 | C-LIKE-DOMAIN C-LIKE, G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2 | MH | MH1-ALPHA_B2M | IMGT (202415-0) | |
B [auth D] | TR 5F3 | TR-DELTA | Homo sapiens (human) | TRDV1*01, TRDJ1*01, TRDC*01 | V-DOMAIN V-DELTA, C-DOMAIN C-DELTA | TR | TR-ALPHA_BETA-1 | IMGT (202415-0) |
C [auth E] | TR 5F3 | TR-GAMMA-2 | Homo sapiens (human) | TRGV8*01, TRGJP2*01, TRGC2*01, TRGC2*02, TRGC2*03, TRGC2*04, TRGC2*05, TRGC2*08, TRGC2*06, TRGC2*07 | V-DOMAIN V-GAMMA, C-DOMAIN C-GAMMA-2 | TR | TR-ALPHA_BETA-1 | IMGT (202415-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |
B [auth D] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
B [auth D] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |