6CGR
CryoEM structure of herpes simplex virus 1 capsid with associated tegument protein complexes.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
EA [auth 4] | Herpes_MCP | e6cgr41 | A: a+b complex topology | X: Major capsid protein VP5 (From Topology) | H: Major capsid protein VP5 (From Topology) | T: Major capsid protein VP5 | F: Herpes_MCP | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03122 | Herpes virus major capsid protein (Herpes_MCP) | Herpes virus major capsid protein | - | Family | |
PF04496 | Herpesvirus UL35 family (Herpes_UL35) | Herpesvirus UL35 family | - | Family | |
FA [auth 5], IA [auth 8], LA [auth b], OA [auth e], RA [auth h] | PF03327 | Herpesvirus capsid shell protein VP19C (Herpes_VP19C) | Herpesvirus capsid shell protein VP19C | - | Family |
PF01802 | Herpesvirus VP23 like capsid protein (Herpes_V23) | Herpesvirus VP23 like capsid protein | - | Family | |
UA [auth k] | PF04559 | Herpesvirus UL17 protein (Herpes_UL17) | Herpesvirus UL17 protein | - | Family |
VA [auth l], WA [auth m] | PF01499 | Herpesvirus UL25 family (Herpes_UL25) | Herpesvirus UL25 family | - | Family |