5XWU

Crystal structure of PTPdelta Ig1-Ig3 in complex with SALM2 LRR-Ig

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AI-sete5xwuA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (1.6)
AI-set_2e5xwuA3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-set_2ECOD (1.6)
CI-sete5xwuC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (1.6)
CI-set_2e5xwuC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-set_2ECOD (1.6)
BI-sete5xwuB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (1.6)
BLRR_8_1e5xwuB2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: LRR_8_1ECOD (1.6)
DI-sete5xwuD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: I-setECOD (1.6)
DLRR_8_1e5xwuD2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: LRR_8_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF13927Immunoglobulin domain (Ig_3)Immunoglobulin domainThis family contains immunoglobulin-like domains.Domain
A, C
PF07679Immunoglobulin I-set domain (I-set)Immunoglobulin I-set domain- Domain
B, D
PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
B, D
PF07679Immunoglobulin I-set domain (I-set)Immunoglobulin I-set domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Receptor-type tyrosine-protein phosphatase delta
B, D
Leucine-rich repeat and fibronectin type III domain-containing protein 1-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, C
IPR003599Immunoglobulin subtypeDomain
A, C
IPR003598Immunoglobulin subtype 2Domain
A, C
IPR003595Protein-tyrosine phosphatase, catalyticDomain
A, C
IPR013098Immunoglobulin I-setDomain
A, C
IPR016130Protein-tyrosine phosphatase, active siteActive Site
A, C
IPR029021Protein-tyrosine phosphatase-likeHomologous Superfamily
A, C
IPR003961Fibronectin type IIIDomain
A, C
IPR000242Tyrosine-specific protein phosphatase, PTPase domainDomain
A, C
IPR000387Tyrosine-specific protein phosphatases domainDomain
A, C
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, C
IPR007110Immunoglobulin-like domainDomain
A, C
IPR045905Receptor-type tyrosine-protein phosphatase delta, PTPase domain, repeat 1Domain
A, C
IPR036116Fibronectin type III superfamilyHomologous Superfamily
B, D
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B, D
IPR003599Immunoglobulin subtypeDomain
B, D
IPR003598Immunoglobulin subtype 2Domain
B, D
IPR003961Fibronectin type IIIDomain
B, D
IPR001611Leucine-rich repeatRepeat
B, D
IPR003591Leucine-rich repeat, typical subtypeRepeat
B, D
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
B, D
IPR013783Immunoglobulin-like foldHomologous Superfamily
B, D
IPR000483Cysteine-rich flanking region, C-terminalDomain
B, D
IPR007110Immunoglobulin-like domainDomain
B, D
IPR013098Immunoglobulin I-setDomain
B, D
IPR036116Fibronectin type III superfamilyHomologous Superfamily