5XDL

Crystal structure of EGFR 696-1022 L858R in complex with CO-1686

Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species
A	d5xdla_	Alpha and beta proteins (a+b)	Protein kinase-like (PK-like)	Protein kinase-like (PK-like)	Protein kinases, catalytic subunit	EGF receptor tyrosine kinase, Erbb-1	Human (Homo sapiens ) [TaxId: 9606 ]

Domain Annotation: CATH CATH Database (version utative) Homepage

Chain	Domain	Class	Architecture	Topology	Homology
A	3.30.200.20	Alpha Beta	2-Layer Sandwich	Phosphorylase Kinase	domain 1
A	1.10.510.10	Mainly Alpha	Orthogonal Bundle	Transferase(Phosphotransferase)	domain 1

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Identifier	Description	Comments	Source
A	PF00757	Furin-like cysteine rich region (Furin-like)	Furin-like cysteine rich region	-	Domain
A	PF01030	Receptor L domain (Recep_L_domain)	Receptor L domain	-	Repeat
A	PF14843	Growth factor receptor domain IV (GF_recep_IV)	Growth factor receptor domain IV	This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1].	Domain
A	PF07714	Protein tyrosine and serine/threonine kinase (PK_Tyr_Ser-Thr)	Protein tyrosine and serine/threonine kinase	Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosp ...	Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity [1]; Serine/threonine-protein kinases, tyrosine-protein kinases, and dual specificity protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins). This entry represents the catalytic domain found in a number of serine/threonine- and tyrosine-protein kinases. It does not include the catalytic domain of dual specificity kinases.	Domain

Gene Product Annotation Gene Product Annotation

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Epidermal growth factor receptor	actin binding binding protein binding cytoskeletal protein binding protein-containing complex binding actin filament binding enzyme binding ATPase binding cadherin binding cell adhesion molecule binding calmodulin binding chromatin binding nucleic acid binding DNA binding double-stranded DNA binding organic cyclic compound binding heterocyclic compound binding growth factor binding hormone binding epidermal growth factor binding catalytic activity protein kinase activity protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane signaling receptor activity epidermal growth factor-activated receptor activity kinase activity transferase activity transferase activity, transferring phosphorus-containing groups phosphotransferase activity, alcohol group as acceptor transmembrane receptor protein kinase activity signaling receptor activity molecular transducer activity catalytic activity, acting on a protein identical protein binding signaling receptor binding integrin binding protein serine/threonine kinase activity MAP kinase kinase kinase activity kinase binding protein kinase binding phosphatase binding protein phosphatase binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding	cellular process cell differentiation developmental process cellular developmental process response to inorganic substance response to metal ion response to chemical response to cadmium ion response to stimulus cellular response to stimulus cellular response to chemical stimulus cellular response to inorganic substance cellular response to metal ion cellular response to cadmium ion response to endogenous stimulus response to hormone response to organic substance response to organic cyclic compound response to corticosteroid cellular response to hormone stimulus response to lipid response to steroid hormone response to glucocorticoid cellular response to organic substance cellular response to steroid hormone stimulus cellular response to corticosteroid stimulus cellular response to glucocorticoid stimulus cellular response to lipid cellular response to organic cyclic compound cellular response to endogenous stimulus response to dexamethasone cellular response to dexamethasone stimulus response to ketone cellular response to ketone response to oxygen-containing compound cellular response to oxygen-containing compound cellular response to drug response to drug response to growth factor response to epidermal growth factor cellular response to growth factor stimulus cellular response to epidermal growth factor stimulus response to estradiol cellular response to estradiol stimulus response to external stimulus response to mechanical stimulus response to abiotic stimulus cellular response to abiotic stimulus cellular response to mechanical stimulus cellular response to external stimulus cellular response to environmental stimulus metabolic process hydrogen peroxide metabolic process cellular metabolic process reactive oxygen species metabolic process magnesium ion homeostasis homeostatic process chemical homeostasis ion homeostasis metal ion homeostasis cation homeostasis biological regulation regulation of biological quality divalent inorganic cation homeostasis inorganic ion homeostasis cellular component organization membrane organization cellular component organization or biogenesis cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation positive regulation of biological process positive regulation of cellular process regulation of biological process regulation of cellular process epithelial cell proliferation regulation of epithelial cell proliferation positive regulation of epithelial cell proliferation fibroblast proliferation regulation of fibroblast proliferation positive regulation of fibroblast proliferation muscle cell proliferation smooth muscle cell proliferation regulation of smooth muscle cell proliferation positive regulation of smooth muscle cell proliferation regulation of monooxygenase activity regulation of catalytic activity regulation of nitric-oxide synthase activity regulation of oxidoreductase activity regulation of molecular function response to calcium ion response to hydroxyisoflavone response to phenylpropanoid response to radiation response to UV response to light stimulus response to UV-A	plasma membrane membrane apical plasma membrane apical part of cell cell periphery plasma membrane region cellular anatomical entity basal plasma membrane basal part of cell basolateral plasma membrane cell junction cell surface intracellular anatomical structure cytoplasm vesicle membrane coated vesicle clathrin-coated vesicle cytoplasmic vesicle membrane coated vesicle membrane clathrin-coated vesicle membrane organelle membrane cytoplasmic vesicle vesicle organelle membrane-bounded organelle intracellular vesicle bounding membrane of organelle endosome early endosome endosome membrane endomembrane system early endosome membrane endocytic vesicle endoplasmic reticulum endoplasmic reticulum membrane organelle subcompartment nuclear outer membrane-endoplasmic reticulum membrane network intracellular organelle intracellular membrane-bounded organelle endoplasmic reticulum subcompartment extracellular region extracellular space focal adhesion cell-substrate junction anchoring junction integral component of plasma membrane integral component of membrane intrinsic component of membrane intrinsic component of plasma membrane membrane raft membrane microdomain late endosome multivesicular body membrane-enclosed lumen vesicle lumen organelle lumen multivesicular body, internal vesicle multivesicular body, internal vesicle lumen nucleus nuclear envelope nuclear membrane organelle envelope envelope perinuclear region of cytoplasm protein-containing complex receptor complex Shc-EGFR complex membrane protein complex plasma membrane protein complex synapse

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.