4V6X

Structure of the human 80S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth AK]SCOP2B SuperfamilyWinged helix DNA-binding domain8055714 3000034 SCOP2B (2022-06-29)
G [auth AM]SCOP2B SuperfamilyL30e-like8063978 3001739 SCOP2B (2022-06-29)
O [auth AB]SCOP2B SuperfamilyRibosomal S3Ae-like8053212 3002166 SCOP2B (2022-06-29)
P [auth AA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8052791 3001397 SCOP2B (2022-06-29)
WA [auth CQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095977 3001045 SCOP2B (2022-06-29)
BB [auth CP]SCOP2 FamilyRibosomal protein L228076703 4001212 SCOP2 (2022-06-29)
BB [auth CP]SCOP2 SuperfamilyRibosomal protein L228076704 3001078 SCOP2 (2022-06-29)
GB [auth CZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053050 3000334 SCOP2B (2022-06-29)
RB [auth Ci]SCOP2B SuperfamilyRibosomal protein L36e8053120 3002161 SCOP2B (2022-06-29)
CC [auth CE]SCOP2B SuperfamilyRibosomal protein L6e N-terminal domain8053099 3002160 SCOP2B (2022-06-29)
CC [auth CE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053100 3000334 SCOP2B (2022-06-29)
J [auth AN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052959 3001284 SCOP2B (2022-06-29)
J [auth AN]SCOP2B SuperfamilyHomeodomain-like8052958 3000001 SCOP2B (2022-06-29)
K [auth AL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052715 3002138 SCOP2B (2022-06-29)
K [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins8052717 3000135 SCOP2B (2022-06-29)
N [auth AT]SCOP2B SuperfamilyWinged helix DNA-binding domain8089318 3000034 SCOP2B (2022-06-29)
Q [auth AV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053139 3000068 SCOP2B (2022-06-29)
S [auth AZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8090992 3000034 SCOP2B (2022-06-29)
T [auth Aa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053143 3000068 SCOP2B (2022-06-29)
V [auth Ac]SCOP2B SuperfamilyNucleic acid-binding proteins8063426 3000135 SCOP2B (2022-06-29)
W [auth AD]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II)8043545 3001043 SCOP2B (2022-06-29)
X [auth Ae]SCOP2B SuperfamilyRibosomal protein S30e-like8053453 3002190 SCOP2B (2022-06-29)
AA [auth AE]SCOP2 FamilyEukaryotic ribosomal protein S4e-like8050328 4006847 SCOP2 (2022-06-29)
AA [auth AE]SCOP2 FamilyCold shock DNA-binding domain-like8048390 4001909 SCOP2 (2022-06-29)
AA [auth AE]SCOP2 FamilyRibosomal protein S4e C-terminal KOW domain-like8044895 4004197 SCOP2 (2022-06-29)
AA [auth AE]SCOP2 SuperfamilyAlpha-L RNA-binding motif8052755 3001473 SCOP2 (2022-06-29)
AA [auth AE]SCOP2 SuperfamilyNucleic acid-binding proteins8052756 3000135 SCOP2 (2022-06-29)
AA [auth AE]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052757 3000334 SCOP2 (2022-06-29)
CA [auth AG]SCOP2B SuperfamilyGS N-terminal domain-like8053171 3000408 SCOP2B (2022-06-29)
C [auth AU]SCOP2B SuperfamilyRibosomal protein S108098806 3001336 SCOP2B (2022-06-29)
DA [auth AF]SCOP2B SuperfamilyRibosomal protein S78066003 3000799 SCOP2B (2022-06-29)
FA [auth AW]SCOP2B SuperfamilyRibosomal protein S88095469 3000709 SCOP2B (2022-06-29)
GA [auth AI]SCOP2B Superfamily50S Ribosomal protein L14-like8053077 3000433 SCOP2B (2022-06-29)
HA [auth AQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082685 3000100 SCOP2B (2022-06-29)
LA [auth Cz]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8098870 3001911 SCOP2B (2022-06-29)
PA [auth CL]SCOP2B SuperfamilyRibosomal protein L13e-like8053155 3002162 SCOP2B (2022-06-29)
QA [auth CV]SCOP2 FamilyRibosomal protein L148072049 4001826 SCOP2 (2022-06-29)
QA [auth CV]SCOP2 Superfamily50S Ribosomal protein L14-like8072050 3000433 SCOP2 (2022-06-29)
SA [auth Ca]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077123 3001045 SCOP2B (2022-06-29)
TA [auth CN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8098812 3000210 SCOP2B (2022-06-29)
UA [auth CI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8100400 3000884 SCOP2B (2022-06-29)
VA [auth CD]SCOP2B SuperfamilyTranslational machinery components8052887 3000571 SCOP2B (2022-06-29)
E [auth AO]SCOP2B SuperfamilyTranslational machinery components8098844 3000571 SCOP2B (2022-06-29)
CB [auth CU]SCOP2B Superfamily60S Ribosomal protein L22e8053060 3002158 SCOP2B (2022-06-29)
DB [auth CX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095967 3000210 SCOP2B (2022-06-29)
EB [auth CY]SCOP2 FamilyRibosomal proteins L24p and L21e8076755 4001752 SCOP2 (2022-06-29)
EB [auth CY]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076756 3000334 SCOP2 (2022-06-29)
JB [auth Cb]SCOP2B SuperfamilyRibosomal protein L29e8053036 3002157 SCOP2B (2022-06-29)
KB [auth CB]SCOP2B SuperfamilyTranslational proteins8078351 3000811 SCOP2B (2022-06-29)
LB [auth CF]SCOP2 FamilyRibosomal protein L30p/L7e8052921 4001360 SCOP2 (2022-06-29)
LB [auth CF]SCOP2 FamilyRibosomal L30p/L7e protein N-terminal domain-lke8050353 4006854 SCOP2 (2022-06-29)
LB [auth CF]SCOP2 SuperfamilyRibosomal protein L30p/L7e8052923 3001378 SCOP2 (2022-06-29)
LB [auth CF]SCOP2 SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052922 3002152 SCOP2 (2022-06-29)
MB [auth Cc]SCOP2B SuperfamilyL30e-like8077491 3001739 SCOP2B (2022-06-29)
PB [auth Cf]SCOP2B SuperfamilyTranslational proteins8087455 3000811 SCOP2B (2022-06-29)
QB [auth Cg]SCOP2B SuperfamilyRibosomal protein L34e-like8053540 3002203 SCOP2B (2022-06-29)
TB [auth Ck]SCOP2B SuperfamilyRibosomal L38e protein-like8053567 3002206 SCOP2B (2022-06-29)
UB [auth Cl]SCOP2B SuperfamilyRibosomal protein L39e8095603 3001756 SCOP2B (2022-06-29)
VB [auth CC]SCOP2B SuperfamilyRibosomal protein L48052832 3001146 SCOP2B (2022-06-29)
VB [auth CC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052831 3002143 SCOP2B (2022-06-29)
YB [auth Cp]SCOP2B SuperfamilyZn-binding ribosomal proteins8101551 3001320 SCOP2B (2022-06-29)
AC [auth CJ]SCOP2 FamilyRibosomal protein L58073891 4001498 SCOP2 (2022-06-29)
AC [auth CJ]SCOP2 SuperfamilyRL5-like8073892 3001709 SCOP2 (2022-06-29)
H [auth AS]SCOP2B SuperfamilyS13-like H2TH domain8101555 3000053 SCOP2B (2022-06-29)
BC [auth CH]SCOP2B SuperfamilyRibosomal protein L68033688 3000724 SCOP2B (2022-06-29)
I [auth Ad]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052572 3000068 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth AK]S10_plectine4v6xAK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
G [auth AM]Ribosomal_L7Aee4v6xAM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
O [auth AB]Ribosomal_S3Ae_Ne4v6xAB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
O [auth AB]Ribosomal_S3Ae_Ce4v6xAB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
P [auth AA]Ribosomal_S2_2e4v6xAA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
R [auth AY]Ribosomal_S24ee4v6xAY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
Y [auth Af]Ribosomal_S27e4v6xAf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
EA [auth AH]Ribosomal_S7e_Ne4v6xAH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
EA [auth AH]Ribosomal_S7e_C_1e4v6xAH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
OA [auth CO]Ribosomal_L13e4v6xCO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
WA [auth CQ]Ribosomal_L18e4v6xCQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
BB [auth CP]Ribosomal_L22e4v6xCP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
FB [auth CW]Ribosomal_L24ee4v6xCW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
GB [auth CZ]Ribosomal_L27ee4v6xCZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
RB [auth Ci]Ribosomal_L36ee4v6xCi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
XB [auth Cn]Ribosomal_L41e4v6xCn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
CC [auth CE]Ribosomal_L6ee4v6xCE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
A [auth Az]GTP_EFTU_D2e4v6xAz2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
A [auth Az]EFG_IVe4v6xAz3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
A [auth Az]EFG_Ce4v6xAz5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
A [auth Az]EFG_IIe4v6xAz1 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
A [auth Az]MnmE_helical_2nde4v6xAz4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
J [auth AN]Ribosomal_S13_Ne4v6xAN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
J [auth AN]Ribosomal_S15_2e4v6xAN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
K [auth AL]Ribosomal_S17_1e4v6xAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
L [auth AR]Ribosomal_S17ee4v6xAR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
M [auth AP]Ribosomal_S19e4v6xAP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
N [auth AT]Ribosomal_S19ee4v6xAT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
Q [auth AV]Ribosomal_S21ee4v6xAV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
S [auth AZ]Ribosomal_S25e4v6xAZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
B [auth Ag]DUF1899e4v6xAg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
T [auth Aa]Ribosomal_S26ee4v6xAa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
U [auth Ab]Ribosomal_S27ee4v6xAb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
V [auth Ac]Ribosomal_S28ee4v6xAc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
W [auth AD]Ribosomal_S3_Ce4v6xAD1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
W [auth AD]KH_2_3e4v6xAD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
X [auth Ae]Ribosomal_S30e4v6xAe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
Z [auth AJ]S4e4v6xAJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
AA [auth AE]Ribosomal_S4ee4v6xAE3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
AA [auth AE]40S_S4_Ce4v6xAE2 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
AA [auth AE]RS4NTe4v6xAE1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
BA [auth AC]Ribosomal_S5_C_1e4v6xAC3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
BA [auth AC]Ribosomal_S5_3e4v6xAC2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
BA [auth AC]Ribosomal_S5_2e4v6xAC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
CA [auth AG]Ribosomal_S6ee4v6xAG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
C [auth AU]Ribosomal_S10_1e4v6xAU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
DA [auth AF]Ribosomal_S7_1e4v6xAF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
FA [auth AW]Ribosomal_S8_N_1e4v6xAW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
FA [auth AW]Ribosomal_S8_C_1e4v6xAW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
GA [auth AI]Ribosomal_S8ee4v6xAI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
HA [auth AQ]Ribosomal_S9e4v6xAQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
IA [auth Ah]HABP4_PAI-RBP1_Ce4v6xAh1 A: extended segmentsX: Suppressor protein STM1 (From Topology)H: Suppressor protein STM1 (From Topology)T: Suppressor protein STM1F: HABP4_PAI-RBP1_CECOD (1.6)
LA [auth Cz]Ribosomal_L1_2nd_1e4v6xCz2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
LA [auth Cz]Ribosomal_L1_1st_1e4v6xCz1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
MA [auth Cq]Ribosomal_L10e4v6xCq3 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
MA [auth Cq]Ribosomal_P0_L10ee4v6xCq2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
NA [auth CK]Ribosomal_L11e4v6xCK1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
NA [auth CK]Ribosomal_L11_Ne4v6xCK2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
PA [auth CL]Ribosomal_L13ee4v6xCL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
QA [auth CV]Ribosomal_L14e4v6xCV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
RA [auth CM]Ribosomal_L14ee4v6xCM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
SA [auth Ca]Ribosomal_L18e4v6xCa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
TA [auth CN]Ribosomal_L15ee4v6xCN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
UA [auth CI]Ribosomal_L16e4v6xCI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
VA [auth CD]Ribosomal_L5ee4v6xCD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
E [auth AO]Ribosomal_S11e4v6xAO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
XA [auth CR]Ribosomal_L19e_Ne4v6xCR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
XA [auth CR]Ribosomal_L19e_Ce4v6xCR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
YA [auth CA]Ribosomal_L2_1e4v6xCA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
YA [auth CA]Ribosomal_L2_C_2e4v6xCA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
ZA [auth CS]Ribosomal_L18Ae4v6xCS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
AB [auth CT]Ribosomal_L21ee4v6xCT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
CB [auth CU]Ribosomal_L22ee4v6xCU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
DB [auth CX]Ribosomal_L23_3e4v6xCX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
EB [auth CY]Ribosomal_L26e4v6xCY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
F [auth AX]Ribosom_S12_S23e4v6xAX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
HB [auth Cr]Ribosomal_L28ee4v6xCr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
IB [auth Ch]Ribosomal_L29_2e4v6xCh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
JB [auth Cb]Ribosomal_L29ee4v6xCb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
KB [auth CB]Ribosomal_L3e4v6xCB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
LB [auth CF]Ribosomal_L30_1e4v6xCF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
MB [auth Cc]Ribosomal_L7Aee4v6xCc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
NB [auth Cd]Ribosomal_L31ee4v6xCd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
OB [auth Ce]Ribosomal_L32ee4v6xCe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
PB [auth Cf]Ribosomal_L35Aee4v6xCf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
QB [auth Cg]Ribosomal_L34ee4v6xCg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
SB [auth Cj]Ribosomal_L37ee4v6xCj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
TB [auth Ck]Ribosomal_L38ee4v6xCk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
UB [auth Cl]Ribosomal_L39e4v6xCl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
VB [auth CC]Ribosomal_L4e4v6xCC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
VB [auth CC]Ribos_L4_asso_Ce4v6xCC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
WB [auth Cm]Ribosomal_L40ee4v6xCm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
YB [auth Cp]Ribosomal_L37aee4v6xCp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
ZB [auth Co]Ribosomal_L44e4v6xCo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
AC [auth CJ]Ribosomal_L5_Ce4v6xCJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
H [auth AS]Ribosomal_S13e4v6xAS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
BC [auth CH]Ribosomal_L6_2e4v6xCH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
BC [auth CH]Ribosomal_L6e4v6xCH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
DC [auth CG]Ribosomal_L7Ae_1e4v6xCG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
GC [auth Cu]Ribosomal_60se4v6xCu1 A: alpha arraysX: 60S acidic ribosomal protein P1/P2 (From Topology)H: 60S acidic ribosomal protein P1/P2 (From Topology)T: 60S acidic ribosomal protein P1/P2F: Ribosomal_60sECOD (1.6)
HC [auth Cv]Ribosomal_60se4v6xCv1 A: alpha arraysX: 60S acidic ribosomal protein P1/P2 (From Topology)H: 60S acidic ribosomal protein P1/P2 (From Topology)T: 60S acidic ribosomal protein P1/P2F: Ribosomal_60sECOD (1.6)
I [auth Ad]Ribosomal_S14_2e4v6xAd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth AK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
G [auth AM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth AB]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
P [auth AA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
P [auth AA]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
R [auth AY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
Y [auth Af]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
EA [auth AH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
OA [auth CO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
WA [auth CQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
BB [auth CP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
FB [auth CW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
GB [auth CZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
GB [auth CZ]PF00467KOW motif (KOW)KOW motif- Family
RB [auth Ci]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
XB [auth Cn]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
CC [auth CE]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
CC [auth CE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
A [auth Az]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
A [auth Az]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
A [auth Az]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
A [auth Az]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
A [auth Az]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
J [auth AN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
J [auth AN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
K [auth AL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
K [auth AL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
L [auth AR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
M [auth AP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
N [auth AT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
Q [auth AV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
S [auth AZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
B [auth Ag]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
T [auth Aa]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
U [auth Ab]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
V [auth Ac]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
W [auth AD]PF07650KH domain (KH_2)KH domain- Domain
W [auth AD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
X [auth Ae]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
Z [auth AJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
Z [auth AJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
AA [auth AE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
AA [auth AE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
AA [auth AE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
AA [auth AE]PF00467KOW motif (KOW)KOW motif- Family
BA [auth AC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
BA [auth AC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
CA [auth AG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
C [auth AU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
DA [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
FA [auth AW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
GA [auth AI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
HA [auth AQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
IA [auth Ah]PF16174Intracellular hyaluronan-binding protein 4 N-terminal (IHABP4_N)Intracellular hyaluronan-binding protein 4 N-terminal- Family
LA [auth Cz]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
MA [auth Cq]PF0042860s Acidic ribosomal protein (Ribosomal_60s)60s Acidic ribosomal protein- Family
MA [auth Cq]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
MA [auth Cq]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
NA [auth CK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
NA [auth CK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
PA [auth CL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
QA [auth CV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
RA [auth CM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
SA [auth Ca]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
TA [auth CN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
UA [auth CI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
VA [auth CD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
VA [auth CD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
E [auth AO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
XA [auth CR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
YA [auth CA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
YA [auth CA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
ZA [auth CS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
AB [auth CT]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
CB [auth CU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
DB [auth CX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
DB [auth CX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
EB [auth CY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
EB [auth CY]PF00467KOW motif (KOW)KOW motif- Family
F [auth AX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
HB [auth Cr]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
IB [auth Ch]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
JB [auth Cb]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
KB [auth CB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
LB [auth CF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
LB [auth CF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
MB [auth Cc]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
NB [auth Cd]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
OB [auth Ce]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
PB [auth Cf]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
QB [auth Cg]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
SB [auth Cj]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
TB [auth Ck]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
UB [auth Cl]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
VB [auth CC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
VB [auth CC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
WB [auth Cm]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
YB [auth Cp]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
ZB [auth Co]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
AC [auth CJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
AC [auth CJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
H [auth AS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
BC [auth CH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
DC [auth CG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
EC [auth Cs],
FC [auth Ct]
PF0042860s Acidic ribosomal protein (Ribosomal_60s)60s Acidic ribosomal protein- Family
GC [auth Cu],
HC [auth Cv]
PF0042860s Acidic ribosomal protein (Ribosomal_60s)60s Acidic ribosomal protein- Family
I [auth Ad]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth AK]40S ribosomal protein S10
G [auth AM]40S ribosomal protein S12
O [auth AB]40S ribosomal protein S3a
P [auth AA]40S ribosomal protein SA
R [auth AY]40S ribosomal protein S24
Y [auth Af]40S ribosomal protein S27a
EA [auth AH]40S ribosomal protein S7
OA [auth CO]60S ribosomal protein L13a
WA [auth CQ]60S ribosomal protein L18
BB [auth CP]60S ribosomal protein L17
FB [auth CW]60S ribosomal protein L24
GB [auth CZ]60S ribosomal protein L27
RB [auth Ci]60S ribosomal protein L36
XB [auth Cn]60S ribosomal protein L41
CC [auth CE]60S ribosomal protein L6
KC [auth A8]5.8S ribosomal RNA---
A [auth Az]Elongation factor 2
J [auth AN]40S ribosomal protein S13
K [auth AL]40S ribosomal protein S11
L [auth AR]40S ribosomal protein S17
M [auth AP]40S ribosomal protein S15
N [auth AT]40S ribosomal protein S19
Q [auth AV]40S ribosomal protein S21
S [auth AZ]40S ribosomal protein S25
B [auth Ag]Guanine nucleotide-binding protein subunit beta-2-like 1
T [auth Aa]40S ribosomal protein S26
U [auth Ab]40S ribosomal protein S27
V [auth Ac]40S ribosomal protein S28
W [auth AD]40S ribosomal protein S3
X [auth Ae]40S ribosomal protein S30
Z [auth AJ]40S ribosomal protein S9
AA [auth AE]40S ribosomal protein S4, X isoform
BA [auth AC]40S ribosomal protein S2
CA [auth AG]40S ribosomal protein S6
C [auth AU]40S ribosomal protein S20
DA [auth AF]40S ribosomal protein S5
FA [auth AW]40S ribosomal protein S15a
GA [auth AI]40S ribosomal protein S8
HA [auth AQ]40S ribosomal protein S16
IA [auth Ah]Plasminogen activator inhibitor 1 RNA-binding protein
JA [auth B2]18S ribosomal RNA---
KA [auth BC]E-tRNA---
LA [auth Cz]60S ribosomal protein L10a
MA [auth Cq]60S acidic ribosomal protein P0
NA [auth CK]60S ribosomal protein L12
PA [auth CL]60S ribosomal protein L13
QA [auth CV]60S ribosomal protein L23
RA [auth CM]60S ribosomal protein L14
SA [auth Ca]60S ribosomal protein L27a
TA [auth CN]60S ribosomal protein L15
UA [auth CI]60S ribosomal protein L10-like
VA [auth CD]60S ribosomal protein L5
E [auth AO]40S ribosomal protein S14
XA [auth CR]60S ribosomal protein L19
YA [auth CA]60S ribosomal protein L8
ZA [auth CS]60S ribosomal protein L18a
AB [auth CT]60S ribosomal protein L21
CB [auth CU]60S ribosomal protein L22
DB [auth CX]60S ribosomal protein L23a
EB [auth CY]60S ribosomal protein L26
F [auth AX]40S ribosomal protein S23
HB [auth Cr]60S ribosomal protein L28
IB [auth Ch]60S ribosomal protein L35
JB [auth Cb]60S ribosomal protein L29
KB [auth CB]60S ribosomal protein L3
LB [auth CF]60S ribosomal protein L7
MB [auth Cc]60S ribosomal protein L30
NB [auth Cd]60S ribosomal protein L31
OB [auth Ce]60S ribosomal protein L32
PB [auth Cf]60S ribosomal protein L35a
QB [auth Cg]60S ribosomal protein L34
SB [auth Cj]60S ribosomal protein L37
TB [auth Ck]60S ribosomal protein L38
UB [auth Cl]60S ribosomal protein L39
VB [auth CC]60S ribosomal protein L4
WB [auth Cm]60S ribosomal protein L40
YB [auth Cp]60S ribosomal protein L37a
ZB [auth Co]60S ribosomal protein L36a
AC [auth CJ]60S ribosomal protein L11
H [auth AS]40S ribosomal protein S18
BC [auth CH]60S ribosomal protein L9
DC [auth CG]60S ribosomal protein L7a
EC [auth Cs],
FC [auth Ct]
60S acidic ribosomal protein P1
GC [auth Cu],
HC [auth Cv]
60S acidic ribosomal protein P2
IC [auth A5]28S ribosomal RNA---
JC [auth A7]5S ribosomal RNA---
I [auth Ad]40S ribosomal protein S29

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth AK]IPR037447Small ribosomal subunit protein eS10Family
D [auth AK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
D [auth AK]IPR005326Plectin/eS10, N-terminalDomain
G [auth AM]IPR000530Small ribosomal subunit protein eS12Family
G [auth AM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
G [auth AM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
G [auth AM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
O [auth AB]IPR001593Small ribosomal subunit protein eS1Family
O [auth AB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
O [auth AB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
P [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
P [auth AA]IPR001865Small ribosomal subunit protein uS2Family
P [auth AA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
P [auth AA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
P [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
P [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
P [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
R [auth AY]IPR001976Small ribosomal subunit protein eS24Family
R [auth AY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
R [auth AY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
Y [auth Af]IPR019954Ubiquitin conserved siteConserved Site
Y [auth Af]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth Af]IPR000626Ubiquitin-like domainDomain
Y [auth Af]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
Y [auth Af]IPR002906Small ribosomal subunit protein eS31Domain
Y [auth Af]IPR019956Ubiquitin domainDomain
Y [auth Af]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
EA [auth AH]IPR000554Small ribosomal subunit protein eS7Family
EA [auth AH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
OA [auth CO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
OA [auth CO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
OA [auth CO]IPR005822Large ribosomal subunit protein uL13Family
OA [auth CO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
WA [auth CQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
WA [auth CQ]IPR000039Large ribosomal subunit protein eL18Family
WA [auth CQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
WA [auth CQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
BB [auth CP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BB [auth CP]IPR001063Large ribosomal subunit protein uL22Family
BB [auth CP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BB [auth CP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
FB [auth CW]IPR011017TRASH domainDomain
FB [auth CW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
FB [auth CW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
FB [auth CW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
GB [auth CZ]IPR001141Large ribosomal subunit protein eL27Family
GB [auth CZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
GB [auth CZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GB [auth CZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
GB [auth CZ]IPR005824KOWDomain
GB [auth CZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
RB [auth Ci]IPR000509Large ribosomal subunit protein eL36Family
RB [auth Ci]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
XB [auth Cn]IPR007836Large ribosomal subunit protein eS32Family
CC [auth CE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
CC [auth CE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
CC [auth CE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CC [auth CE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
CC [auth CE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CC [auth CE]IPR000915Large ribosomal subunit protein eL6Family
A [auth Az]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
A [auth Az]IPR000795Translational (tr)-type GTP-binding domainDomain
A [auth Az]IPR035647EF-G domain III/V-likeHomologous Superfamily
A [auth Az]IPR041095Elongation Factor G, domain IIDomain
A [auth Az]IPR004161Translation elongation factor EFTu-like, domain 2Domain
A [auth Az]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
A [auth Az]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
A [auth Az]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth Az]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
A [auth Az]IPR000640Elongation factor EFG, domain V-likeDomain
A [auth Az]IPR031157Tr-type G domain, conserved siteConserved Site
A [auth Az]IPR005225Small GTP-binding protein domainDomain
J [auth AN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
J [auth AN]IPR000589Small ribosomal subunit protein uS15Family
J [auth AN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
J [auth AN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
K [auth AL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
K [auth AL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
K [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth AL]IPR000266Small ribosomal subunit protein uS17Family
K [auth AL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
L [auth AR]IPR001210Small ribosomal subunit protein eS17Family
L [auth AR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
L [auth AR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
M [auth AP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
M [auth AP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
M [auth AP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
M [auth AP]IPR002222Small ribosomal subunit protein uS19Family
N [auth AT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
N [auth AT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
N [auth AT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
N [auth AT]IPR001266Small ribosomal subunit protein eS19Family
Q [auth AV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Q [auth AV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
Q [auth AV]IPR001931Small ribosomal subunit protein eS21Family
S [auth AZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
S [auth AZ]IPR004977Small ribosomal subunit protein eS25Family
B [auth Ag]IPR019775WD40 repeat, conserved siteConserved Site
B [auth Ag]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
B [auth Ag]IPR045223Small ribosomal subunit protein RACK1-likeFamily
B [auth Ag]IPR020472G-protein beta WD-40 repeatRepeat
B [auth Ag]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth Ag]IPR001680WD40 repeatRepeat
T [auth Aa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
T [auth Aa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
T [auth Aa]IPR000892Small ribosomal subunit protein eS26Family
U [auth Ab]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
U [auth Ab]IPR000592Small ribosomal subunit protein eS27Family
U [auth Ab]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
V [auth Ac]IPR028626Ribosomal protein eS28 conserved siteConserved Site
V [auth Ac]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
V [auth Ac]IPR000289Small ribosomal subunit protein eS28Family
W [auth AD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
W [auth AD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
W [auth AD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
W [auth AD]IPR004044K Homology domain, type 2Domain
W [auth AD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
W [auth AD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
W [auth AD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
X [auth Ae]IPR019954Ubiquitin conserved siteConserved Site
X [auth Ae]IPR000626Ubiquitin-like domainDomain
X [auth Ae]IPR006846Small ribosomal subunit protein eS30Family
X [auth Ae]IPR039415Ubiquitin-like protein FUBIDomain
X [auth Ae]IPR019956Ubiquitin domainDomain
X [auth Ae]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
Z [auth AJ]IPR002942RNA-binding S4 domainDomain
Z [auth AJ]IPR022801Small ribosomal subunit protein uS4Family
Z [auth AJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
Z [auth AJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
Z [auth AJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
Z [auth AJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
AA [auth AE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
AA [auth AE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
AA [auth AE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
AA [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth AE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
AA [auth AE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
AA [auth AE]IPR002942RNA-binding S4 domainDomain
AA [auth AE]IPR000876Small ribosomal subunit protein eS4Family
AA [auth AE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
AA [auth AE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
AA [auth AE]IPR005824KOWDomain
BA [auth AC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth AC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
BA [auth AC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
BA [auth AC]IPR000851Small ribosomal subunit protein uS5Family
BA [auth AC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
BA [auth AC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
BA [auth AC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
CA [auth AG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
CA [auth AG]IPR001377Small ribosomal subunit protein eS6Family
CA [auth AG]IPR014401Small ribosomal subunit protein eS6-likeFamily
C [auth AU]IPR027486Small ribosomal subunit protein uS10 domainDomain
C [auth AU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
C [auth AU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
C [auth AU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
C [auth AU]IPR001848Small ribosomal subunit protein uS10Family
DA [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
DA [auth AF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
DA [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
DA [auth AF]IPR000235Small ribosomal subunit protein uS7Family
DA [auth AF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
FA [auth AW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
FA [auth AW]IPR000630Small ribosomal subunit protein uS8Family
FA [auth AW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
GA [auth AI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
GA [auth AI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
GA [auth AI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
GA [auth AI]IPR001047Small ribosomal subunit protein eS8Family
HA [auth AQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
HA [auth AQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth AQ]IPR000754Small ribosomal subunit protein uS9Family
HA [auth AQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IA [auth Ah]IPR039764RNA binding protein HABP4/SERBP1-likeFamily
IA [auth Ah]IPR006861Hyaluronan/mRNA-binding proteinDomain
IA [auth Ah]IPR032381Intracellular hyaluronan-binding protein 4, N-terminal domainDomain
LA [auth Cz]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
LA [auth Cz]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
LA [auth Cz]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
LA [auth Cz]IPR002143Large ribosomal subunit protein uL1Family
LA [auth Cz]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
MA [auth Cq]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
MA [auth Cq]IPR001790Large ribosomal subunit protein uL10Family
MA [auth Cq]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
MA [auth Cq]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
MA [auth Cq]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
NA [auth CK]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
NA [auth CK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
NA [auth CK]IPR000911Ribosomal protein uL11Family
NA [auth CK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
NA [auth CK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
NA [auth CK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
PA [auth CL]IPR001380Large ribosomal subunit protein eL13Family
PA [auth CL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
QA [auth CV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
QA [auth CV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
QA [auth CV]IPR000218Large ribosomal subunit protein uL14Family
RA [auth CM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth CM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth CM]IPR039660Large ribosomal subunit protein eL14Family
RA [auth CM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
RA [auth CM]IPR002784Large ribosomal subunit protein eL14 domainDomain
SA [auth Ca]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
SA [auth Ca]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
SA [auth Ca]IPR021131Large ribosomal subunit protein uL15/eL18Domain
SA [auth Ca]IPR030878Large ribosomal subunit protein uL15Family
SA [auth Ca]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
TA [auth CN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
TA [auth CN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TA [auth CN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
TA [auth CN]IPR000439Large ribosomal subunit protein eL15Family
UA [auth CI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
UA [auth CI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
UA [auth CI]IPR047873Large ribosomal subunit protein uL16Family
UA [auth CI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
UA [auth CI]IPR016180Large ribosomal subunit protein uL16 domainDomain
VA [auth CD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
VA [auth CD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
E [auth AO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
E [auth AO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
E [auth AO]IPR001971Small ribosomal subunit protein uS11Family
XA [auth CR]IPR039547Large ribosomal subunit protein eL19Family
XA [auth CR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
XA [auth CR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
XA [auth CR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
XA [auth CR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
XA [auth CR]IPR000196Large ribosomal subunit protein eL19 domainDomain
YA [auth CA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
YA [auth CA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth CA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
YA [auth CA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
YA [auth CA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
YA [auth CA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YA [auth CA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
YA [auth CA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
YA [auth CA]IPR002171Large ribosomal subunit protein uL2Family
ZA [auth CS]IPR028877Large ribosomal subunit protein eL20Family
ZA [auth CS]IPR023573Large ribosomal subunit protein eL20 domainDomain
ZA [auth CS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
AB [auth CT]IPR001147Large ribosomal subunit protein eL21Family
AB [auth CT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AB [auth CT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
AB [auth CT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
CB [auth CU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
CB [auth CU]IPR002671Large ribosomal subunit protein eL22Family
DB [auth CX]IPR019985Large ribosomal subunit protein uL23Family
DB [auth CX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
DB [auth CX]IPR013025Large ribosomal subunit protein uL23-likeFamily
DB [auth CX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
DB [auth CX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
DB [auth CX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
EB [auth CY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
EB [auth CY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
EB [auth CY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
EB [auth CY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EB [auth CY]IPR005824KOWDomain
EB [auth CY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
F [auth AX]IPR006032Small ribosomal subunit protein uS12Family
F [auth AX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth AX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
HB [auth Cr]IPR029004Ribosomal eL28/Mak16Domain
HB [auth Cr]IPR002672Large ribosomal subunit protein eL28Family
IB [auth Ch]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IB [auth Ch]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
IB [auth Ch]IPR001854Large ribosomal subunit protein uL29Family
IB [auth Ch]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
JB [auth Cb]IPR002673Large ribosomal subunit protein eL29Family
KB [auth CB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
KB [auth CB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
KB [auth CB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
KB [auth CB]IPR000597Large ribosomal subunit protein uL3Family
KB [auth CB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
LB [auth CF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
LB [auth CF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
LB [auth CF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
LB [auth CF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
LB [auth CF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
LB [auth CF]IPR039699Large ribosomal subunit protein uL30Family
LB [auth CF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
MB [auth Cc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
MB [auth Cc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
MB [auth Cc]IPR000231Large ribosomal subunit protein eL30Family
MB [auth Cc]IPR039109Large ribosomal subunit protein eL30-likeFamily
MB [auth Cc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
NB [auth Cd]IPR000054Large ribosomal subunit protein eL31Family
NB [auth Cd]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
NB [auth Cd]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
OB [auth Ce]IPR001515Large ribosomal subunit protein eL32Family
OB [auth Ce]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
OB [auth Ce]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
PB [auth Cf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
PB [auth Cf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
PB [auth Cf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
PB [auth Cf]IPR001780Large ribosomal subunit protein eL33Family
QB [auth Cg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
QB [auth Cg]IPR008195Large ribosomal subunit protein eL34Family
SB [auth Cj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SB [auth Cj]IPR001569Large ribosomal subunit protein eL37Family
SB [auth Cj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
SB [auth Cj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TB [auth Ck]IPR002675Large ribosomal subunit protein eL38Family
TB [auth Ck]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
UB [auth Cl]IPR000077Large ribosomal subunit protein eL39Family
UB [auth Cl]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
UB [auth Cl]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
VB [auth CC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
VB [auth CC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
VB [auth CC]IPR002136Large ribosomal subunit protein uL4Family
VB [auth CC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
VB [auth CC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
WB [auth Cm]IPR019954Ubiquitin conserved siteConserved Site
WB [auth Cm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
WB [auth Cm]IPR000626Ubiquitin-like domainDomain
WB [auth Cm]IPR019956Ubiquitin domainDomain
WB [auth Cm]IPR001975Large ribosomal subunit protein eL40 domainDomain
WB [auth Cm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
YB [auth Cp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
YB [auth Cp]IPR002674Large ribosomal subunit protein eL43Family
YB [auth Cp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Co]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Co]IPR000552Large ribosomal subunit protein eL42Family
AC [auth CJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
AC [auth CJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
AC [auth CJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
AC [auth CJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
AC [auth CJ]IPR002132Large ribosomal subunit protein uL5Family
H [auth AS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
H [auth AS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
H [auth AS]IPR001892Small ribosomal subunit protein uS13Family
H [auth AS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
BC [auth CH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
BC [auth CH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
BC [auth CH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
BC [auth CH]IPR000702Large ribosomal subunit protein uL6-likeFamily
DC [auth CG]IPR001921Large ribosomal subunit protein eL8Family
DC [auth CG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DC [auth CG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
DC [auth CG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
DC [auth CG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
EC [auth Cs],
FC [auth Ct]
IPR038716Large ribosomal subunit protein P1/P2, N-terminal domainHomologous Superfamily
EC [auth Cs],
FC [auth Ct]
IPR027534Large ribosomal subunit protein P1/P2Family
GC [auth Cu],
HC [auth Cv]
IPR038716Large ribosomal subunit protein P1/P2, N-terminal domainHomologous Superfamily
GC [auth Cu],
HC [auth Cv]
IPR027534Large ribosomal subunit protein P1/P2Family
GC [auth Cu],
HC [auth Cv]
IPR044076Large ribosomal subunit protein P2, eukaryotesFamily
I [auth Ad]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
I [auth Ad]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
I [auth Ad]IPR001209Small ribosomal subunit protein uS14Family
I [auth Ad]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D [auth AK]PharosP46783
G [auth AM]PharosP25398
P [auth AA]PharosP08865
R [auth AY]PharosP62847
Y [auth Af]PharosP62979
EA [auth AH]PharosP62081
OA [auth CO]PharosP40429
WA [auth CQ]PharosQ07020
BB [auth CP]PharosP18621
FB [auth CW]PharosP83731
GB [auth CZ]PharosP61353
RB [auth Ci]PharosQ9Y3U8
XB [auth Cn]PharosP62945
CC [auth CE]PharosQ02878
A [auth Az]PharosP13639
J [auth AN]PharosP62277
K [auth AL]PharosP62280
L [auth AR]PharosP08708
M [auth AP]PharosP62841
N [auth AT]PharosP39019
Q [auth AV]PharosP63220
S [auth AZ]PharosP62851
B [auth Ag]PharosP63244
T [auth Aa]PharosP62854
U [auth Ab]PharosP42677
V [auth Ac]PharosP62857
W [auth AD]PharosP23396
X [auth Ae]PharosP62861
Z [auth AJ]PharosP46781
AA [auth AE]PharosP62701
BA [auth AC]PharosP15880
CA [auth AG]PharosP62753
C [auth AU]PharosP60866
DA [auth AF]PharosP46782
FA [auth AW]PharosP62244
GA [auth AI]PharosP62241
HA [auth AQ]PharosP62249
IA [auth Ah]PharosQ8NC51
LA [auth Cz]PharosP62906
MA [auth Cq]PharosP05388
NA [auth CK]PharosP30050
PA [auth CL]PharosP26373
QA [auth CV]PharosP62829
RA [auth CM]PharosP50914
SA [auth Ca]PharosP46776
TA [auth CN]PharosP61313
UA [auth CI]PharosQ96L21
VA [auth CD]PharosP46777
E [auth AO]PharosP62263
XA [auth CR]PharosP84098
AB [auth CT]PharosP46778
CB [auth CU]PharosP35268
DB [auth CX]PharosP62750
EB [auth CY]PharosP61254
F [auth AX]PharosP62266
HB [auth Cr]PharosP46779
IB [auth Ch]PharosP42766
KB [auth CB]PharosP39023
LB [auth CF]PharosP18124
MB [auth Cc]PharosP62888
NB [auth Cd]PharosP62899
OB [auth Ce]PharosP62910
PB [auth Cf]PharosP18077
QB [auth Cg]PharosP49207
SB [auth Cj]PharosP61927
TB [auth Ck]PharosP63173
VB [auth CC]PharosP36578
WB [auth Cm]PharosP62987
YB [auth Cp]PharosP61513
ZB [auth Co]PharosP83881
AC [auth CJ]PharosP62913
H [auth AS]PharosP62269
BC [auth CH]PharosP32969
DC [auth CG]PharosP62424
GC [auth Cu],
HC [auth Cv]
PharosP05387
I [auth Ad]PharosP62273