4RFX

Crystal Structure of the Dynactin DCTN1 Fragment involved in Dynein Interaction

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Dynactin DCTN1 coiled coil domain-like	8106448	3002856	SCOP2B (2022-06-29)
D	SCOP2 Family	Dynactin DCTN1 coiled coil domain-like	8047567	4005702	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Dynactin DCTN1 coiled coil domain-like	8106448	3002856	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Dynactin DCTN1 coiled coil domain-like	8106448	3002856	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dynactin DCTN1 coiled coil domain-like	8106448	3002856	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dynactin DCTN1 coiled coil domain-like	8106448	3002856	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF12455	Dynein associated protein (Dynactin)	Dynein associated protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Dynactin subunit 1	cytoskeletal protein binding microtubule binding protein binding binding tubulin binding	regulation of cytoskeleton organization regulation of cellular component organization regulation of cellular process microtubule cytoskeleton organization regulation of mitotic spindle organization mitotic cell cycle cellular component organization cell cycle cellular component organization or biogenesis regulation of cell cycle microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process regulation of biological process regulation of cytoskeleton organization regulation of cellular component organization regulation of cellular process microtubule cytoskeleton organization regulation of mitotic spindle organization mitotic cell cycle cellular component organization cell cycle cellular component organization or biogenesis regulation of cell cycle microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process regulation of biological process regulation of cell cycle process biological regulation regulation of microtubule-based process regulation of spindle organization regulation of organelle organization mitotic spindle organization organelle organization mitotic cell cycle process cellular process microtubule-based process cytoskeleton organization regulation of microtubule cytoskeleton organization cytoplasmic microtubule organization supramolecular fiber organization establishment of organelle localization cellular localization spindle localization establishment or maintenance of cell polarity localization establishment of mitotic spindle localization establishment of spindle localization establishment of spindle orientation organelle localization establishment of localization in cell establishment of localization establishment of cell polarity establishment of mitotic spindle orientation cell division transport nucleus localization intracellular transport nuclear migration protein localization regulation of localization establishment of protein localization nitrogen compound transport regulation of protein localization positive regulation of biological process positive regulation of establishment of protein localization positive regulation of protein transport cellular macromolecule localization positive regulation of intracellular transport positive regulation of cellular process regulation of intracellular transport regulation of transport organic substance transport regulation of establishment of protein localization regulation of protein transport positive regulation of transport protein transport regulation of cellular localization macromolecule localization positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport intracellular protein transport	intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle spindle pole cellular anatomical entity microtubule cytoskeleton non-membrane-bounded organelle chromosome chromosomal region kinetochore chromosome, centromeric region intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle spindle pole cellular anatomical entity microtubule cytoskeleton non-membrane-bounded organelle chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome cell periphery cell cortex cytoplasm centrosome microtubule organizing center polymeric cytoskeletal fiber microtubule end supramolecular fiber microtubule supramolecular polymer microtubule plus-end centriole axon cell projection neuron projection plasma membrane bounded cell projection protein-containing complex microtubule associated complex catalytic complex dynein complex cell cortex region cytoplasmic region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR036859	CAP Gly-rich domain superfamily	Homologous Superfamily
A, B, C, D, E	IPR022157	Dynein associated protein	Domain
A, B, C, D, E	IPR000938	CAP Gly-rich domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.