4OCI

Crystal Structure of Calcium Binding Protein-5 from Entamoeba histolytica and its involvement in initiation of phagocytosis of human erythrocytes


Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4ocia1 All alpha proteins EF Hand-like EF-hand automated matches automated matches (Entamoeba histolytica HM-1:IMSS-A ) [TaxId: 885318 ], SCOPe (2.08)
Ad4ocia2 Artifacts Tags Tags Tags C-terminal Tags (Entamoeba histolytica HM-1:IMSS-A ) [TaxId: 885318 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEF-hand_7e4ociA2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7ECOD (1.6)
AEF-hand_7_8e4ociA1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.238.10 Mainly Alpha Orthogonal Bundle Recoverin domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13833EF-hand domain pair (EF-hand_8)EF-hand domain pair- Domain
PF00036EF hand (EF-hand_1)EF handThe EF-hands can be divided into two classes: signalling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typica ...The EF-hands can be divided into two classes: signalling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Calmodulin, putative - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018247EF-Hand 1, calcium-binding siteBinding Site
IPR002048EF-hand domainDomain
IPR011992EF-hand domain pairHomologous Superfamily