4L29

Structure of wtMHC class I with NY-ESO1 double mutant


Domain Annotation: SCOP Classification SCOP Database (version: 2.0) Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpecies
Ad4l29a2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Ad4l29a1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
BAd4l29s2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
BAd4l29s1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Dd4l29c2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Dd4l29c1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
EAd4l29u2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
EAd4l29u1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Gd4l29e2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Gd4l29e1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
HAd4l29w2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
HAd4l29w1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Jd4l29g2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Jd4l29g1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
KAd4l29y2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
KAd4l29y1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Md4l29i2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Md4l29i1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Pd4l29k2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Pd4l29k1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Sd4l29m2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Sd4l29m1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Vd4l29o2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Vd4l29o1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Yd4l29q2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) Class I MHC, alpha-3 domain human (Homo sapiens ) [TaxId: 9606 ]
Yd4l29q1 Alpha and beta proteins (a+b) MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain Class I MHC, alpha-1 and alpha-2 domains human (Homo sapiens ) [TaxId: 9606 ]
Bd4l29b1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Bd4l29b2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
CAd4l29t1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
CAd4l29t2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Ed4l29d1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Ed4l29d2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
FAd4l29v1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
FAd4l29v2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Hd4l29f1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Hd4l29f2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
IAd4l29x1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
IAd4l29x2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Kd4l29h1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Kd4l29h2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
LAd4l29z1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
LAd4l29z2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Nd4l29j1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Nd4l29j2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Qd4l29l1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Qd4l29l2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Td4l29n1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Td4l29n2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Wd4l29p1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Wd4l29p2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
Zd4l29r1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) beta2-microglobulin human (Homo sapiens ) [TaxId: 9606 ]
Zd4l29r2 Artifacts Tags Tags Tags N-terminal Tags human (Homo sapiens ) [TaxId: 9606 ]
ChainDomainClassArchitectureTopologyHomology
A3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
BA3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
BA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
D3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
EA3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
EA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
G3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
G2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
HA3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
HA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
J3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
KA3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
KA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
M3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
M2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
NA3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
NA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
P3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
P2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
S3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
S2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
V3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
V2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
Y3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1
Y2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
CA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
FA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
H2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
IA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
LA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
N2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
OA2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
Q2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
T2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
W2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins
Z2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like Immunoglobulins

Protein Family Annotation Pfam Database Homepage

ChainsAccessionIdentifierDescriptionCommentsSource
A, BA, D, EA, G, HA, J, KA, M, NA, P, S, V, YPF00129Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I)Class I Histocompatibility antigen, domains alpha 1 and 2- Domain
A, BA, D, EA, G, HA, J, KA, M, NA, P, S, V, YPF06623MHC_I C-terminus (MHC_I_C)MHC_I C-terminus- Family
A, BA, D, EA, G, HA, J, KA, M, NA, P, S, V, YPF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
B, CA, E, FA, H, IA, K, LA, N, OA, Q, T, W, ZPF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain

Gene Product Annotation Gene Product Annotation

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G, I, K, M, O, Q, S, U, W, Y, aHLA class I histocompatibility antigen, A-2 alpha chain
c, e, f, g, h, i, j, k, l, m, n, o, p, qNY-ESO1 DOUBLE MUTANT (1Y, 9V)none none none
B, D, F, H, J, L, N, P, R, T, V, X, Z, bBeta-2-microglobulin