4H8A

Crystal structure of ureidoglycolate dehydrogenase in binary complex with NADH

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d4h8aa_	Alpha and beta proteins (a/b)	L-sulfolactate dehydrogenase-like	L-sulfolactate dehydrogenase-like	L-sulfolactate dehydrogenase-like	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d4h8ab_	Alpha and beta proteins (a/b)	L-sulfolactate dehydrogenase-like	L-sulfolactate dehydrogenase-like	L-sulfolactate dehydrogenase-like	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	L-sulfolactate dehydrogenase-like	8044136	3000527	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	L-sulfolactate dehydrogenase-like	8044136	3000527	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ldh_2	e4h8aA1	A: a+b three layers	X: L-sulfolactate dehydrogenase-like (From Topology)	H: L-sulfolactate dehydrogenase-like (From Topology)	T: L-sulfolactate dehydrogenase-like	F: Ldh_2	ECOD (1.6)
B	Ldh_2	e4h8aB1	A: a+b three layers	X: L-sulfolactate dehydrogenase-like (From Topology)	H: L-sulfolactate dehydrogenase-like (From Topology)	T: L-sulfolactate dehydrogenase-like	F: Ldh_2	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1530.10	Mainly Alpha	Orthogonal Bundle	Hypothetical Oxidoreductase Yiak	Chain: A, domain 1	CATH (4.3.0)
A	3.30.1370.60	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (4.3.0)
B	1.10.1530.10	Mainly Alpha	Orthogonal Bundle	Hypothetical Oxidoreductase Yiak	Chain: A, domain 1	CATH (4.3.0)
B	3.30.1370.60	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02615	Malate/L-lactate dehydrogenase (Ldh_2)	Malate/L-lactate dehydrogenase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Ureidoglycolate dehydrogenase	ureidoglycolate dehydrogenase activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors catalytic activity	organonitrogen compound catabolic process allantoin metabolic process catabolic process organonitrogen compound metabolic process cellular metabolic process organic cyclic compound catabolic process cellular catabolic process organic cyclic compound metabolic process organic substance metabolic process heterocycle metabolic process amide catabolic process heterocycle catabolic process nitrogen compound metabolic process metabolic process organonitrogen compound catabolic process allantoin metabolic process catabolic process organonitrogen compound metabolic process cellular metabolic process organic cyclic compound catabolic process cellular catabolic process organic cyclic compound metabolic process organic substance metabolic process heterocycle metabolic process amide catabolic process heterocycle catabolic process nitrogen compound metabolic process metabolic process cellular process amide metabolic process allantoin assimilation pathway allantoin catabolic process organic substance catabolic process purine nucleobase metabolic process cellular nitrogen compound metabolic process primary metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process nucleobase-containing small molecule metabolic process nucleobase metabolic process small molecule metabolic process cellular aromatic compound metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR017590	Ureidoglycolate dehydrogenase	Family
A, B	IPR043143	Malate/L-sulfolactate/L-lactate dehydrogenase-like, NADPH binding domain	Homologous Superfamily
A, B	IPR043144	Malate/L-sulfolactate/L-lactate dehydrogenase-like, alpha-helical domain	Homologous Superfamily
A, B	IPR003767	Malate/L-lactate dehydrogenase-like	Family
A, B	IPR036111	Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.