4H3W

Crystal structure of a putative secreted protein (BDI_1231) from Parabacteroides distasonis ATCC 8503 at 2.00 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Putative secreted protein BDI_1231-like	8051205	4007246	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Putative secreted protein BDI_1231-like	8102530	3002734	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Putative secreted protein BDI_1231-like	8102531	3002734	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Putative secreted protein BDI_1231-like	8102530	3002734	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Putative secreted protein BDI_1231-like	8102531	3002734	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF4621_1st	e4h3wA2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: DUF4621_1st	ECOD (1.6)
A	DUF4621_2nd	e4h3wA1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: DUF4621_2nd	ECOD (1.6)
B	DUF4621_1st	e4h3wB2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: DUF4621_1st	ECOD (1.6)
B	DUF4621_2nd	e4h3wB1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: DUF4621_2nd	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.290.20	Mainly Beta	Sandwich	Hypothetical Protein Tm1070	Chain: A	CATH (4.3.0)
A	2.60.120.1260	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.290.20	Mainly Beta	Sandwich	Hypothetical Protein Tm1070	Chain: A	CATH (4.3.0)
B	2.60.120.1260	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF15414	Protein of unknown function (DUF4621) (DUF4621)	Protein of unknown function (DUF4621)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR027977	Protein of unknown function DUF4621	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	MLY	Parent Component: LYS RESID: AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084
A, B	MSE	Parent Component: MET RESID: AA0075

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.