4GAW

Crystal structure of active human granzyme H


Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4gawa_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd4gawb_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd4gawc_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd4gawd_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed4gawe_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd4gawf_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd4gawg_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd4gawh_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id4gawi_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd4gawj_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd4gawk_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld4gawl_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00089e4gawA2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
BPF00089e4gawB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
CPF00089e4gawC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
DPF00089e4gawD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
EPF00089e4gawE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
FPF00089e4gawF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
GPF00089e4gawG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
HPF00089e4gawH2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
IPF00089e4gawI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
JPF00089e4gawJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
KPF00089e4gawK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
LPF00089e4gawL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00089Trypsin (Trypsin)Trypsin- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B, C, D, E
IPR001314Peptidase S1A, chymotrypsin familyFamily
A, B, C, D, E
IPR033116Serine proteases, trypsin family, serine active siteActive Site
A, B, C, D, E
IPR001254Serine proteases, trypsin domainDomain
A, B, C, D, E
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A, B, C, D, E
IPR018114Serine proteases, trypsin family, histidine active siteActive Site