4CRI
Crystal Structure of 53BP1 tandem tudor domains in complex with methylated K810 Rb peptide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8041640 | 3000404 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8041642 | 3000404 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8041642 | 3000404 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8041640 | 3000404 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | 53-BP1_Tudor_C | e4criA2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: 53-BP1_Tudor_C | ECOD (1.6) |
A | 53-BP1_Tudor_N | e4criA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: 53-BP1_Tudor_N | ECOD (1.6) |
B | 53-BP1_Tudor_C | e4criB2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: 53-BP1_Tudor_C | ECOD (1.6) |
B | 53-BP1_Tudor_N | e4criB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: 53-BP1_Tudor_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
A | 2.30.30.30 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
B | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) | |
B | 2.30.30.30 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09038 | Tumour suppressor p53-binding protein-1 Tudor (53-BP1_Tudor) | Tumour suppressor p53-binding protein-1 Tudor | Members of this family consist of ten beta-strands and a carboxy-terminal alpha-helix. The amino-terminal five beta-strands and the C-terminal five beta-strands adopt folds that are identical to each other. This domain is essential for the recruitmen ... | Domain | |
PF08934 | Rb C-terminal domain (Rb_C) | Rb C-terminal domain | The Rb C-terminal domain is required for high-affinity binding to E2F-DP complexes and for maximal repression of E2F-responsive promoters, thereby acting as a growth suppressor by blocking the G1-S transition of the cell cycle. This domain has a stra ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR047252 | TP53-binding protein 1-like | Family | |
IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily | |
IPR001357 | BRCT domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR047249 | TP53-binding protein 1-like, first BRCT domain | Domain | |
IPR047250 | TP53-binding protein 1-like, second BRCT domain | Domain | |
IPR015125 | Tumour suppressor p53-binding protein-1 Tudor domain | Domain | |
IPR024599 | Retinoblastoma-associated protein, N-terminal | Domain | |
IPR015030 | Retinoblastoma-associated protein, C-terminal | Domain | |
IPR002720 | Retinoblastoma-associated protein, A-box | Domain | |
IPR028309 | Retinoblastoma protein family | Family | |
IPR002719 | Retinoblastoma-associated protein, B-box | Domain | |
IPR036915 | Cyclin-like superfamily | Homologous Superfamily | |
IPR013763 | Cyclin-like domain | Domain |