Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3tgva1 All beta proteins Split barrel-like FMN-binding split barrel automated matches automated matches (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Ad3tgva3 Artifacts Tags Tags Tags C-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Ad3tgva2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Bd3tgvb1 All beta proteins Split barrel-like FMN-binding split barrel automated matches automated matches (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Bd3tgvb3 Artifacts Tags Tags Tags C-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Bd3tgvb2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Cd3tgvc1 All beta proteins Split barrel-like FMN-binding split barrel automated matches automated matches (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Cd3tgvc3 Artifacts Tags Tags Tags C-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Cd3tgvc2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Dd3tgvd1 All beta proteins Split barrel-like FMN-binding split barrel automated matches automated matches (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Dd3tgvd3 Artifacts Tags Tags Tags C-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)
Dd3tgvd2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio cholerae O395 ) [TaxId: 345073 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPNP-oxidase like8065373 4002129 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyFMN-binding split barrel8065374 3000856 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyFMN-binding split barrel8065374 3000856 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFMN-binding split barrel8065374 3000856 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFMN-binding split barrel8065374 3000856 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01243e3tgvA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: PF01243ECOD (1.6)
BPF01243e3tgvB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: PF01243ECOD (1.6)
CPF01243e3tgvC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: PF01243ECOD (1.6)
DPF01243e3tgvD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: PF01243ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
B2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
C2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
D2.30.110.10 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF01243Pyridoxamine 5'-phosphate oxidase (Putative_PNPOx)Pyridoxamine 5'-phosphate oxidaseFamily of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, ...Family of domains with putative PNPOx function. Family members were predicted to encode pyridoxamine 5'-phosphate oxidase, based on sequence similarity. However, there is no experimental data to validate the predicted activity and purified proteins, such as Swiss:Q06199 and its paralogs, do not possess this activity, nor do they bind to flavin mononucleotide (FMN). To date, the only time functional oxidase activity has been experimentally demonstrated is when the sequences contain both Pfam:PF01243 and Pfam:PF10590. Moreover, some of the family members that contain both domains have been shown to be involved in phenazine biosynthesis. While some molecular function has been experimentally validated for the proteins containing both domains, the role performed by each domain on its own is unknown [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage