Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00998e3hkwA1 A: alpha bundlesX: helical bundle domain in reverse transcriptase-like polymerases (From Topology)H: helical bundle domain in reverse transcriptase-like polymerases (From Topology)T: helical bundle domain in reverse transcriptase-like polymerasesF: PF00998ECOD (1.6)
APF00998e3hkwA2 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: PF00998ECOD (1.6)
BPF00998e3hkwB1 A: alpha bundlesX: helical bundle domain in reverse transcriptase-like polymerases (From Topology)H: helical bundle domain in reverse transcriptase-like polymerases (From Topology)T: helical bundle domain in reverse transcriptase-like polymerasesF: PF00998ECOD (1.6)
BPF00998e3hkwB2 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: PF00998ECOD (1.6)
CPF00998e3hkwC1 A: alpha bundlesX: helical bundle domain in reverse transcriptase-like polymerases (From Topology)H: helical bundle domain in reverse transcriptase-like polymerases (From Topology)T: helical bundle domain in reverse transcriptase-like polymerasesF: PF00998ECOD (1.6)
CPF00998e3hkwC2 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: PF00998ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00998Viral RNA dependent RNA polymerase (RdRP_3)Viral RNA dependent RNA polymerase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
NS5B RNA-dependent RNA polymerase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR002522Hepatitis C virus, Core protein, N-terminalDomain
A, B, C
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A, B, C
IPR038568Hepatitis C virus NS5A, 1B domain superfamilyHomologous Superfamily
A, B, C
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B, C
IPR001650Helicase, C-terminal domain-likeDomain
A, B, C
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A, B, C
IPR002868Hepatitis C virus, Non-structural 5a proteinDomain
A, B, C
IPR038170NS5A domain 1a superfamilyHomologous Superfamily
A, B, C
IPR002518Hepatitis C virus, Non-structural protein NS2Domain
A, B, C
IPR013192Hepatitis C virus, Non-structural 5a protein, domain 1aDomain
A, B, C
IPR002521Hepatitis C virus, Core protein, C-terminalDomain
A, B, C
IPR042209Hepatitis C virus non-structural protein NS2, N-terminal domainHomologous Superfamily
A, B, C
IPR000745Hepatitis C virus, Non-structural protein NS4aDomain
A, B, C
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
A, B, C
IPR042205Hepatitis C virus non-structural protein NS2, C-terminal domainHomologous Superfamily
A, B, C
IPR002166RNA dependent RNA polymerase, hepatitis C virusFamily
A, B, C
IPR002519Hepatitis C virus, Envelope glycoprotein E1Domain
A, B, C
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A, B, C
IPR044896Hepatitis C virus core protein, chain A superfamilyHomologous Superfamily
A, B, C
IPR024350Hepatitus C virus, Non-structural 5a protein, C-terminalDomain
A, B, C
IPR013193Hepatitis C virus non-structural 5a, 1B domainDomain
A, B, C
IPR004109Hepatitis C virus, NS3 proteaseDomain
A, B, C
IPR002531Hepatitis C virus, Non-structural protein E2/NS1Domain
A, B, C
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A, B, C
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A, B, C
IPR001490Hepatitis C virus, Non-structural protein NS4bDomain