3HEI

Ligand Recognition by A-Class Eph Receptors: Crystal Structures of the EphA2 Ligand-Binding Domain and the EphA2/ephrin-A1 Complex


Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3heia_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd3heic_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed3heie_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id3heii_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd3heik_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Md3heim_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Od3heio_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd3heig_ All beta proteins Galactose-binding domain-like Galactose-binding domain-like automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd3heib1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd3heib2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd3heid1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd3heid2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd3heih1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd3heih2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd3heij1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd3heij2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld3heil1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld3heil2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Nd3hein1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Nd3hein2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Pd3heip1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Pd3heip2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd3heif1 All beta proteins Cupredoxin-like Cupredoxins automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd3heif2 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
CSCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
ESCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
ISCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
KSCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
MSCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
OSCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
GSCOP2B Superfamilygalactose-binding domain-like8082078 3000087 SCOP2B (2022-06-29)
BSCOP2 FamilyEphrin ectodomain8061906 4002092 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyCupredoxins8061907 3000886 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCupredoxins8061907 3000886 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEphrin_lbde3heiA1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
CEphrin_lbde3heiC1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
EEphrin_lbde3heiE1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
IEphrin_lbde3heiI1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
KEphrin_lbde3heiK1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
MEphrin_lbde3heiM1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
OEphrin_lbde3heiO1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
GEphrin_lbde3heiG1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Ephrin_lbdECOD (1.6)
BEphrine3heiB1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
DEphrine3heiD1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
HEphrine3heiH1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
JEphrine3heiJ1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
LEphrine3heiL1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
NEphrine3heiN1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
PEphrine3heiP1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)
FEphrine3heiF1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: EphrinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
C2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
E2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
I2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
K2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
M2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
O2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
G2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
B2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
D2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
H2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
J2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
L2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
N2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
P2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
F2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G, I
PF01404Ephrin receptor ligand binding domain (Ephrin_lbd)Ephrin receptor ligand binding domainThe Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1].Domain
B, D, F, H, J
PF00812Ephrin (Ephrin)Ephrin- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G, I
Ephrin type-A receptor 2
B, D, F, H, J
Ephrin-A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E, G, I
IPR001426Tyrosine-protein kinase, receptor class V, conserved siteConserved Site
A, C, E, G, I
IPR008266Tyrosine-protein kinase, active siteActive Site
A, C, E, G, I
IPR020635Tyrosine-protein kinase, catalytic domainDomain
A, C, E, G, I
IPR000719Protein kinase domainDomain
A, C, E, G, I
IPR016257Ephrin receptor type-A /type-BFamily
A, C, E, G, I
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, C, E, G, I
IPR001660Sterile alpha motif domainDomain
A, C, E, G, I
IPR001090Ephrin receptor ligand binding domainDomain
A, C, E, G, I
IPR034263Ephrin type-A receptor 2, ligand binding domainDomain
A, C, E, G, I
IPR017441Protein kinase, ATP binding siteBinding Site
A, C, E, G, I
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A, C, E, G, I
IPR027936Ephrin receptor, transmembrane domainDomain
A, C, E, G, I
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
A, C, E, G, I
IPR013761Sterile alpha motif/pointed domain superfamilyHomologous Superfamily
A, C, E, G, I
IPR003961Fibronectin type IIIDomain
A, C, E, G, I
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
A, C, E, G, I
IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
A, C, E, G, I
IPR036116Fibronectin type III superfamilyHomologous Superfamily
B, D, F, H, J
IPR019765Ephrin, conserved siteConserved Site
B, D, F, H, J
IPR008972CupredoxinHomologous Superfamily
B, D, F, H, J
IPR031328EphrinFamily
B, D, F, H, J
IPR034252Ephrin-A ectodomainDomain
B, D, F, H, J
IPR001799Ephrin receptor-binding domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C, E, G, I
PharosP29317
B, D, F, H, J
PharosP20827