3CF4
Structure of the CODH component of the M. barkeri ACDS complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth G] | SCOP2 Family | ACDE2-like | 8064119 | 4002610 | SCOP2 (2022-06-29) |
B [auth G] | SCOP2 Superfamily | DHS-like NAD/FAD-binding domain | 8064120 | 3001728 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Fer4_21_1 | e3cf4A4 | A: alpha arrays | X: alpha-helical ferredoxin-like | H: alpha-helical ferredoxin (From Topology) | T: alpha-helical ferredoxin | F: Fer4_21_1 | ECOD (1.6) |
A | Prismane_2nd_1 | e3cf4A2 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: Prismane_2nd_1 | ECOD (1.6) |
A | Prismane_4th | e3cf4A3 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: Prismane_4th | ECOD (1.6) |
A | Prismane_3rd | e3cf4A1 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: Prismane_3rd | ECOD (1.6) |
B [auth G] | CO_dh | e3cf4G1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: CO_dh | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.2030 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B [auth G] | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03063 | Prismane/CO dehydrogenase family (Prismane) | Prismane/CO dehydrogenase family | - | Family | |
PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain | |
B [auth G] | PF02552 | CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit (CO_dh) | CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016099 | Prismane-like, alpha/beta-sandwich | Homologous Superfamily | |
IPR004137 | Hydroxylamine reductase/Ni-containing CO dehydrogenase | Family | |
IPR017900 | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | Conserved Site | |
IPR004460 | Acetyl-CoA decarbonylase/synthase complex subunit alpha | Family | |
IPR017896 | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Domain | |
IPR011254 | Prismane-like superfamily | Homologous Superfamily | |
B [auth G] | IPR003704 | Acetyl-CoA decarbonylase/synthase complex subunit epsilon | Family |
B [auth G] | IPR029035 | DHS-like NAD/FAD-binding domain superfamily | Homologous Superfamily |