3C2W

Crystal structure of the photosensory core domain of P. aeruginosa bacteriophytochrome PaBphP in the Pfr state

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3c2wa1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
A	d3c2wa2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
A	d3c2wa3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
B	d3c2wb1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
B	d3c2wb2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
B	d3c2wb3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
C	d3c2wc1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
C	d3c2wc2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
C	d3c2wc3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
D	d3c2wd1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
D	d3c2wd2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
D	d3c2wd3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
E	d3c2we1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
E	d3c2we2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
E	d3c2we3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
F	d3c2wf1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
F	d3c2wf2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
F	d3c2wf3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
F	d3c2wf4	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
H	d3c2wh1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
H	d3c2wh2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
H	d3c2wh3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
G	d3c2wg1	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	GAF domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
G	d3c2wg2	Alpha and beta proteins (a+b)	Profilin-like	GAF domain-like	Phytochrome-specific domain	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)
G	d3c2wg3	Alpha and beta proteins (a+b)	Profilin-like	PYP-like sensor domain (PAS domain)	BphP N-terminal domain-like	Bacteriophytochrome BphP	(Pseudomonas aeruginosa ) [TaxId: 287 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	GAF domain	8027332	4001852	SCOP2 (2022-06-29)
A	SCOP2 Family	Phytochrome-specific domain	8027333	4002314	SCOP2 (2022-06-29)
A	SCOP2 Family	BphP N-terminal domain-like	8027334	4002319	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	GAF domain-like	8039711	3000080	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	GAF domain-like	8039712	3000080	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GAF domain-like	8039712	3000080	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GAF domain-like	8039711	3000080	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	PYP-like sensor domain (PAS domain)	8039713	3000471	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PAS_2	e3c2wA3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
A	PHY	e3c2wA2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
A	GAF	e3c2wA1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
B	PAS_2	e3c2wB3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
B	PHY	e3c2wB2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
B	GAF	e3c2wB1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
C	PAS_2	e3c2wC3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
C	PHY	e3c2wC2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
C	GAF	e3c2wC1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
D	PAS_2	e3c2wD3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
D	PHY	e3c2wD2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
D	GAF	e3c2wD1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
E	PAS_2	e3c2wE3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
E	PHY	e3c2wE2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
E	GAF	e3c2wE1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
F	PAS_2	e3c2wF3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
F	PHY	e3c2wF2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
F	GAF	e3c2wF1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
H	PAS_2	e3c2wH3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
H	PHY	e3c2wH2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
H	GAF	e3c2wH1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)
G	PAS_2	e3c2wG3	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PAS_2	ECOD (1.6)
G	PHY	e3c2wG2	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: PHY	ECOD (1.6)
G	GAF	e3c2wG1	A: a+b three layers	X: Profilin-like	H: sensor domains (From Topology)	T: sensor domains	F: GAF	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
A	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
A	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
B	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
B	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
B	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
C	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
C	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
C	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
D	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
D	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
D	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
E	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
E	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
E	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
F	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
F	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
F	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
H	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
H	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
H	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)
G	3.30.450.40	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	GAF domain	CATH (4.3.0)
G	3.30.450.20	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PAS domain	CATH (4.3.0)
G	3.30.450.270	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	PHY domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF01590	GAF domain (GAF)	GAF domain	This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyse ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regul ...	This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl cyclases, phytochromes, FhlA and NifA. Adenylyl and guanylyl cyclases catalyse ATP and GTP to the second messengers cAMP and cGMP, respectively, these products up-regulating catalytic activity by binding to the regulatory GAF domain(s). The opposite hydrolysis reaction is catalysed by phosphodiesterase. cGMP-dependent 3',5'-cyclic phosphodiesterase catalyses the conversion of guanosine 3',5'-cyclic phosphate to guanosine 5'-phosphate. Here too, cGMP regulates catalytic activity by GAF-domain binding. Phytochromes are regulatory photoreceptors in plants and bacteria which exist in two thermally-stable states that are reversibly inter-convertible by light: the Pr state absorbs maximally in the red region of the spectrum, while the Pfr state absorbs maximally in the far-red region. This domain is also found in FhlA (formate hydrogen lyase transcriptional activator) and NifA, a transcriptional activator which is required for activation of most Nif operons which are directly involved in nitrogen fixation. NifA interacts with sigma-54. This domain can bind biliverdine and phycocyanobilin (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF00360	Phytochrome region (PHY)	Phytochrome region	Phytochromes are red/far-red photochromic biliprotein photoreceptors which regulate plant development. They are widely represented in both photosynthetic and non-photosynthetic bacteria and are known in a variety of fungi. Although sequence similarit ...	Phytochromes are red/far-red photochromic biliprotein photoreceptors which regulate plant development. They are widely represented in both photosynthetic and non-photosynthetic bacteria and are known in a variety of fungi. Although sequence similarities are low, this domain is structurally related to Pfam:PF01590 [1], which is generally located immediately N-terminal to this domain. Compared with Pfam:PF01590, this domain carries an additional tongue-like hairpin loop between the fifth beta-sheet and the sixth alpha-helix which functions to seal the chromophore pocket and stabilise the photoactivated far-red-absorbing state (Pfr) [1]. The tongue carries a conserved PRxSF motif, from which an arginine finger points into the chromophore pocket close to ring D forming a salt bridge with a conserved aspartate residue [1].	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF08446	PAS fold (PAS_2)	PAS fold	The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Bacteriophytochrome	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity catalytic activity, acting on a protein small molecule sensor activity kinase activity protein kinase activity transferase activity phosphotransferase activity, nitrogenous group as acceptor phosphotransferase activity, alcohol group as acceptor protein histidine kinase activity transferase activity, transferring phosphorus-containing groups phosphorelay sensor kinase activity catalytic activity molecular transducer activity photoreceptor activity signaling receptor activity phosphorelay response regulator activity identical protein binding protein binding	regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process regulation of nitrogen compound metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance metabolic process heterocycle metabolic process organic substance biosynthetic process nitrogen compound metabolic process regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process regulation of nitrogen compound metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance metabolic process heterocycle metabolic process organic substance biosynthetic process nitrogen compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process cellular metabolic process biological regulation cellular nitrogen compound metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process heterocycle biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process aromatic compound biosynthetic process organic cyclic compound biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process cellular aromatic compound metabolic process cellular response to stimulus osmosensory signaling via phosphorelay pathway response to stimulus signaling cellular response to chemical stress intracellular signal transduction cellular response to environmental stimulus cell communication osmosensory signaling pathway cellular response to stress response to stress signal transduction response to osmotic stress phosphorelay signal transduction system cellular response to osmotic stress cellular response to chemical stimulus response to chemical response to abiotic stimulus cellular response to abiotic stimulus detection of light stimulus response to light stimulus detection of external stimulus detection of stimulus detection of visible light response to external stimulus response to radiation detection of abiotic stimulus	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013515	Phytochrome, central region	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003594	Histidine kinase/HSP90-like ATPase	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR043150	Phytochrome, PHY domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013654	PAS fold-2	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR035965	PAS domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR005467	Histidine kinase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003018	GAF domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR029016	GAF-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001294	Phytochrome	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016132	Phytochrome chromophore attachment domain	Domain