2TBV

STRUCTURE OF TOMATO BUSHY STUNT VIRUS. V. COAT PROTEIN SEQUENCE DETERMINATION AND ITS STRUCTURAL IMPLICATIONS


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyTombusviridae-like VP8028407 4003478 SCOP2 (2022-06-29)
ASCOP2 FamilyCNV-CP protruding P-domain-like8089974 4007693 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPositive stranded ssRNA viruses-like8040786 3000918 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCNV-CP protruding P-domain-like8089975 3002408 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyCNV-CP protruding P-domain-like8089975 3002408 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPositive stranded ssRNA viruses-like8040786 3000918 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCNV-CP protruding P-domain-like8089975 3002408 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPositive stranded ssRNA viruses-like8040786 3000918 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00729e2tbvA2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
APF22402e2tbvA3 A: beta sandwichesX: jelly-rollH: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology)T: ssRNA positive-strand viruses coat protein P (projecting) domainF: PF22402ECOD (1.6)
BPF00729e2tbvB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
BPF22402e2tbvB2 A: beta sandwichesX: jelly-rollH: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology)T: ssRNA positive-strand viruses coat protein P (projecting) domainF: PF22402ECOD (1.6)
CPF00729e2tbvC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
CPF22402e2tbvC2 A: beta sandwichesX: jelly-rollH: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology)T: ssRNA positive-strand viruses coat protein P (projecting) domainF: PF22402ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00729Viral coat protein (S domain) (Viral_coat)Viral coat protein (S domain)- Domain

InterPro: Protein Family Classification InterPro Database Homepage