Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd2hiob_ All alpha proteins Histone-fold Histone-fold Nucleosome core histones Histone H2B (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)
Cd2hioc_ All alpha proteins Histone-fold Histone-fold Nucleosome core histones Histone H3 (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)
Dd2hiod_ All alpha proteins Histone-fold Histone-fold Nucleosome core histones Histone H4 (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)
Ad2hioa_ All alpha proteins Histone-fold Histone-fold Nucleosome core histones Histone H2A (Gallus gallus ) [TaxId: 9031 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCore histone-like8040592 3001387 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCore histone-like8040595 3001387 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCore histone-like8040598 3001387 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCore histone-like8040591 3001387 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BHistonee2hioB1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
CHistonee2hioC1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: HistoneECOD (1.6)
DHistone_1e2hioD1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)
AHistone_1e2hioA1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: Histone_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.20.10 Mainly Alpha Orthogonal Bundle Histone, subunit A Histone, subunit ACATH (4.3.0)
C1.10.20.10 Mainly Alpha Orthogonal Bundle Histone, subunit A Histone, subunit ACATH (4.3.0)
D1.10.20.10 Mainly Alpha Orthogonal Bundle Histone, subunit A Histone, subunit ACATH (4.3.0)
A1.10.20.10 Mainly Alpha Orthogonal Bundle Histone, subunit A Histone, subunit ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
PF00125Core histone H2A/H2B/H3/H4 (Histone)Core histone H2A/H2B/H3/H4- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PROTEIN (HISTONE H2B) -
PROTEIN (HISTONE H3) -
PROTEIN (HISTONE H4)
PROTEIN (HISTONE H2A) -