Annotations: 2GLI

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C [auth A]	d2glia1	Small proteins	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	Classic zinc finger, C2H2	Five-finger GLI1	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth A]	SCOP2 Family	Classic zinc finger C2H2	8026567	4003583	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Family	Classic zinc finger C2H2	8026571	4003583	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Family	Classic zinc finger C2H2	8026573	4003583	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Family	Classic zinc finger C2H2	8026575	4003583	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Family	Classic zinc finger C2H2	8026576	4003583	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	beta-beta-alpha zinc fingers	8038946	3001077	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	beta-beta-alpha zinc fingers	8038950	3001077	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	beta-beta-alpha zinc fingers	8038952	3001077	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	beta-beta-alpha zinc fingers	8038954	3001077	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	beta-beta-alpha zinc fingers	8038955	3001077	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth A]	zf-C2H2_18	e2gliA5	A: few secondary structure elements	X: beta-beta-alpha zinc fingers	H: beta-beta-alpha zinc fingers (From Topology)	T: beta-beta-alpha zinc fingers	F: zf-C2H2_18	ECOD (1.6)
C [auth A]	zf-C2H2_17	e2gliA1	A: few secondary structure elements	X: beta-beta-alpha zinc fingers	H: beta-beta-alpha zinc fingers (From Topology)	T: beta-beta-alpha zinc fingers	F: zf-C2H2_17	ECOD (1.6)
C [auth A]	FOXP-CC	e2gliA2	A: few secondary structure elements	X: beta-beta-alpha zinc fingers	H: beta-beta-alpha zinc fingers (From Topology)	T: beta-beta-alpha zinc fingers	F: FOXP-CC	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth A]	3.30.160.60	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	Classic Zinc Finger	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth A]	PF00096	Zinc finger, C2H2 type (zf-C2H2)	Zinc finger, C2H2 type	The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, an ...	The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	DNA (5'-D(TPTPTPCPGPTPCPTPTPGPGPGPTPGPGPTPCPCPAPCP*G)-3')	-	-	-
B [auth D]	DNA (5'-D(APCPGPTPGPGPAPCPCPAPCPCPCPAPAPGPAPCPGPAP*A)-3')	-	-	-
C [auth A]	PROTEIN (FIVE-FINGER GLI)	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding organic cyclic compound binding nucleic acid binding transcription regulatory region nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity cytoskeletal protein binding microtubule binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding organic cyclic compound binding nucleic acid binding transcription regulatory region nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity cytoskeletal protein binding microtubule binding protein binding tubulin binding DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity cation binding ion binding metal ion binding small molecule binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding protein-containing complex binding chromatin binding	developmental process multicellular organismal process reproductive system development prostate gland development reproductive process gland development animal organ development urogenital system development developmental process involved in reproduction multicellular organism development anatomical structure development reproductive structure development system development regulation of hepatocyte proliferation developmental process multicellular organismal process reproductive system development prostate gland development reproductive process gland development animal organ development urogenital system development developmental process involved in reproduction multicellular organism development anatomical structure development reproductive structure development system development regulation of hepatocyte proliferation regulation of cellular process liver development gland morphogenesis animal organ morphogenesis epithelial cell proliferation liver morphogenesis regulation of biological process cell population proliferation biological regulation epithelial cell proliferation involved in liver morphogenesis anatomical structure morphogenesis hepatocyte proliferation regulation of cell population proliferation hepaticobiliary system development cellular process regulation of epithelial cell proliferation regulation of growth positive regulation of cell population proliferation regulation of cardiac muscle tissue growth regulation of developmental process developmental growth cardiac muscle cell proliferation positive regulation of biological process organ growth striated muscle tissue development positive regulation of developmental process positive regulation of cardiac muscle cell proliferation regulation of organ growth regulation of heart growth regulation of cardiac muscle cell proliferation muscle cell proliferation regulation of multicellular organismal process cardiac muscle tissue growth muscle tissue development positive regulation of developmental growth positive regulation of cellular process striated muscle cell proliferation positive regulation of heart growth heart development heart growth regulation of multicellular organismal development regulation of developmental growth cardiac muscle tissue development positive regulation of organ growth growth tissue development circulatory system development positive regulation of growth positive regulation of cardiac muscle tissue growth positive regulation of multicellular organismal process dorsal/ventral pattern formation pattern specification process regionalization cellular response to stimulus response to stimulus signaling negative regulation of signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway regulation of response to stimulus regulation of cell communication positive regulation of DNA replication regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of metabolic process organic substance metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of nucleobase-containing compound metabolic process primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process organic cyclic compound metabolic process DNA replication positive regulation of DNA metabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process regulation of DNA replication cerebellum morphogenesis cerebellar cortex morphogenesis head development hindbrain morphogenesis brain development nervous system development cerebellar cortex development cerebellum development central nervous system development metencephalon development hindbrain development forebrain development endocrine system development pituitary gland development diencephalon development ventral midline development spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism gamete generation male gamete generation cell differentiation germ cell development cellular biosynthetic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance biosynthetic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process organic cyclic compound biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription response to stress response to wounding digestive system development tube development digestive tract development tube morphogenesis digestive tract morphogenesis epithelium development epidermal cell differentiation epidermis development epithelial cell differentiation notochord regression embryonic organ morphogenesis embryonic morphogenesis notochord morphogenesis embryo development anatomical structure regression embryonic organ development notochord development positive regulation of macromolecule biosynthetic process transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of cellular metabolic process positive regulation of biosynthetic process positive regulation of RNA biosynthetic process positive regulation of cellular biosynthetic process regulation of osteoblast differentiation regulation of cell differentiation osteoblast differentiation ossification smoothened signaling pathway regulation of smoothened signaling pathway respiratory tube development lung development respiratory system development positive regulation of cell communication positive regulation of signal transduction positive regulation of response to stimulus positive regulation of smoothened signaling pathway positive regulation of signaling animal organ regeneration regeneration liver regeneration positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion regulation of cell cycle phase transition regulation of cell cycle process cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition positive regulation of cell cycle positive regulation of cell cycle G1/S phase transition positive regulation of cell cycle phase transition positive regulation of cell cycle process cell cycle regulation of cell cycle cell cycle process proximal/distal pattern formation	membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cytoskeleton organelle intracellular non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cytoskeleton organelle intracellular non-membrane-bounded organelle cytoplasm non-membrane-bounded organelle cytosol ciliary tip protein-containing complex GLI-SUFU complex nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen ciliary base

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth A]	IPR013087	Zinc finger C2H2-type	Domain
C [auth A]	IPR043359	C2H2-type zinc-finger protein GLI-like	Family
C [auth A]	IPR036236	Zinc finger C2H2 superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth A]	Pharos: P08151	acute promyelocytic leukemia diffuse large B-cell lymphoma peripheral nervous system disease urinary bladder cancer peripheral neuropathy cancer gastrointestinal stromal tumor glioblastoma Liver carcinoma medulloblastoma atypical teratoid rhabdoid tumor Ellis-van Creveld syndrome heart disease malignant mesothelioma nevoid basal cell carcinoma syndrome acute promyelocytic leukemia diffuse large B-cell lymphoma peripheral nervous system disease urinary bladder cancer peripheral neuropathy cancer gastrointestinal stromal tumor glioblastoma Liver carcinoma medulloblastoma atypical teratoid rhabdoid tumor Ellis-van Creveld syndrome heart disease malignant mesothelioma nevoid basal cell carcinoma syndrome urinary bladder neoplasm hepatocellular carcinoma osteosarcoma psoriasis

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.