Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1vg5a1 All alpha proteins RuvA C-terminal domain-like UBA-like UBA domain Rhomboid family protein At3g58460 thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], SCOPe (2.08)
Ad1vg5a3 Artifacts Tags Tags Tags C-terminal Tags thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], SCOPe (2.08)
Ad1vg5a2 Artifacts Tags Tags Tags N-terminal Tags thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyUBA domain8030698 4000749 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyUBA-like8043077 3001235 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00627e1vg5A1 A: alpha arraysX: RuvA-CH: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology)T: RuvA-C, UBA, CRAL/TRIO-N, HBS1F: PF00627ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.8.10 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00627UBA/TS-N domain (UBA)UBA/TS-N domainThis small domain is composed of three alpha helices. This family includes the previously defined UBA and TS-N domains. The UBA-domain (ubiquitin associated domain) is a novel sequence motif found in several proteins having connections to ubiquitin a ...This small domain is composed of three alpha helices. This family includes the previously defined UBA and TS-N domains. The UBA-domain (ubiquitin associated domain) is a novel sequence motif found in several proteins having connections to ubiquitin and the ubiquitination pathway. The structure of the UBA domain consists of a compact three helix bundle [1]. This domain is found at the N terminus of EF-TS hence the name TS-N. The structure of EF-TS is known and this domain is implicated in its interaction with EF-TU [2]. The domain has been found in non EF-TS proteins such as alpha-NAC Swiss:P70670 and MJ0280 Swiss:Q57728 [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
rhomboid family protein

InterPro: Protein Family Classification InterPro Database Homepage