1TXK

Crystal structure of Escherichia coli OpgG

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1txka1	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	E-set domains of sugar-utilizing enzymes	Glucans biosynthesis protein G (MdoG, OpgG), C-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d1txka2	All beta proteins	Supersandwich	Galactose mutarotase-like	MdoG-like	Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d1txka3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1txkb1	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	E-set domains of sugar-utilizing enzymes	Glucans biosynthesis protein G (MdoG, OpgG), C-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1txkb2	All beta proteins	Supersandwich	Galactose mutarotase-like	MdoG-like	Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1txkb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	MdoG-like	8028137	4001741	SCOP2 (2022-06-29)
A	SCOP2 Family	E-set domains of sugar-utilizing enzymes	8054950	4007565	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Galactose mutarotase-like	8040516	3000035	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	E set domains	8054951	3000070	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	E set domains	8054951	3000070	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Galactose mutarotase-like	8040516	3000035	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MdoG_C	e1txkA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: MdoG_C	ECOD (1.6)
A	MdoG_N	e1txkA2	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: supersandwich (From Topology)	T: supersandwich	F: MdoG_N	ECOD (1.6)
B	MdoG_C	e1txkB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: MdoG_C	ECOD (1.6)
B	MdoG_N	e1txkB2	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: supersandwich (From Topology)	T: supersandwich	F: MdoG_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.70.98.10	Mainly Beta	Distorted Sandwich	Beta-galactosidase	Chain A, domain 5	CATH (4.3.0)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B	2.70.98.10	Mainly Beta	Distorted Sandwich	Beta-galactosidase	Chain A, domain 5	CATH (4.3.0)
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF04349	Periplasmic glucan biosynthesis protein, MdoG (MdoG)	Periplasmic glucan biosynthesis protein, MdoG	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Glucans biosynthesis protein G	binding carbohydrate binding catalytic activity	carbohydrate metabolic process glucan biosynthetic process beta-glucan metabolic process polysaccharide biosynthetic process cellular biosynthetic process carbohydrate biosynthetic process cellular metabolic process primary metabolic process macromolecule biosynthetic process beta-glucan biosynthetic process polysaccharide metabolic process organic substance metabolic process glucan metabolic process biosynthetic process organic substance biosynthetic process carbohydrate metabolic process glucan biosynthetic process beta-glucan metabolic process polysaccharide biosynthetic process cellular biosynthetic process carbohydrate biosynthetic process cellular metabolic process primary metabolic process macromolecule biosynthetic process beta-glucan biosynthetic process polysaccharide metabolic process organic substance metabolic process glucan metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process	outer membrane-bounded periplasmic space cell envelope periplasmic space cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR014438	Glucan biosynthesis protein MdoG/MdoD	Family
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, B	IPR023704	Glucan biosynthesis protein G	Family
A, B	IPR014718	Glycoside hydrolase-type carbohydrate-binding	Homologous Superfamily
A, B	IPR011013	Galactose mutarotase-like domain superfamily	Homologous Superfamily
A, B	IPR007444	Glucan biosynthesis, periplasmic, MdoG C-terminal	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Monotopic/peripheral	All beta monotopic/peripheral	Immunoglobulin-like superfamily (E set)	Periplasmic glucan biosynthesis protein, MdoG

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.