1QXM
Crystal structure of a hemagglutinin component (HA1) from type C Clostridium botulinum
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1qxma1 | All beta proteins | beta-Trefoil | Ricin B-like lectins | Ricin B-like | Hemagglutinin component Ha1 | (Clostridium botulinum D phage ) [TaxId: 29342 ], | SCOPe (2.08) |
| B | d1qxmb1 | All beta proteins | beta-Trefoil | Ricin B-like lectins | Ricin B-like | Hemagglutinin component Ha1 | (Clostridium botulinum D phage ) [TaxId: 29342 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Ricin B-like | 8027691 | 4002005 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Ricin B-like | 8027692 | 4002005 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Ricin B-like lectins | 8040070 | 3000678 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Ricin B-like lectins | 8040071 | 3000678 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | F_UNCLASSIFIED | e1qxmA1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: F_UNCLASSIFIED | ECOD (1.6) |
| A | PF14200 | e1qxmA2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: PF14200 | ECOD (1.6) |
| B | F_UNCLASSIFIED | e1qxmB1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: F_UNCLASSIFIED | ECOD (1.6) |
| B | PF14200 | e1qxmB2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: PF14200 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| B | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF14200 | Ricin-type beta-trefoil lectin domain-like (RicinB_lectin_2) | Ricin-type beta-trefoil lectin domain-like | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| HA1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
| IPR000772 | Ricin B, lectin domain | Domain |
