1P3R

Crystal structure of the phosphotyrosin binding domain(PTB) of mouse Disabled 1(Dab1)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1p3ra_	All beta proteins	PH domain-like barrel	PH domain-like	Phosphotyrosine-binding domain (PTB)	Disabled homolog 2 (Dab2)	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
B	d1p3rb_	All beta proteins	PH domain-like barrel	PH domain-like	Phosphotyrosine-binding domain (PTB)	Disabled homolog 2 (Dab2)	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
C	d1p3rc_	All beta proteins	PH domain-like barrel	PH domain-like	Phosphotyrosine-binding domain (PTB)	Disabled homolog 2 (Dab2)	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Phosphotyrosine-binding domain (PTB)	8025773	4002427	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PH domain-like	8038152	3000134	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	PH domain-like	8038152	3000134	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PH domain-like	8038152	3000134	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PID	e1p3rA1	A: beta barrels	X: PH domain-like	H: PH domain-like (From Topology)	T: PH domain-like	F: PID	ECOD (1.6)
B	PID	e1p3rB1	A: beta barrels	X: PH domain-like	H: PH domain-like (From Topology)	T: PH domain-like	F: PID	ECOD (1.6)
C	PID	e1p3rC1	A: beta barrels	X: PH domain-like	H: PH domain-like (From Topology)	T: PH domain-like	F: PID	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
B	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
C	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF21792	Disabled homolog 2-like, sulfatide-binding motifs (DAB2_SBM)	Disabled homolog 2-like, sulfatide-binding motifs	-	Motif
A, B, C	PF00640	Phosphotyrosine interaction domain (PTB/PID) (PID)	Phosphotyrosine interaction domain (PTB/PID)	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Disabled homolog 2	binding phospholipid binding lipid binding phosphatidylinositol binding protein-containing complex binding AP-2 adaptor complex binding clathrin binding protein binding cargo receptor activity ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phosphatidylinositol phosphate binding binding phospholipid binding lipid binding phosphatidylinositol binding protein-containing complex binding AP-2 adaptor complex binding clathrin binding protein binding cargo receptor activity ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phosphatidylinositol phosphate binding small molecule binding cell adhesion molecule binding integrin binding signaling receptor binding SMAD binding cargo adaptor activity clathrin adaptor activity protein-macromolecule adaptor activity molecular adaptor activity low-density lipoprotein particle receptor binding lipoprotein particle receptor binding	developmental process stem cell proliferation cell population proliferation cellular developmental process hemopoiesis cell differentiation anatomical structure development hematopoietic stem cell proliferation cell development cellular process cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process developmental process stem cell proliferation cell population proliferation cellular developmental process hemopoiesis cell differentiation anatomical structure development hematopoietic stem cell proliferation cell development cellular process cellular response to stimulus positive regulation of cell communication cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway biological regulation positive regulation of intracellular signal transduction positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway SMAD protein signal transduction regulation of response to stimulus regulation of cell communication regulation of SMAD protein signal transduction positive regulation of SMAD protein signal transduction positive regulation of signaling negative regulation of signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of biological process negative regulation of cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process Wnt signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway Wnt signaling pathway, planar cell polarity pathway positive regulation of non-canonical Wnt signaling pathway positive regulation of Wnt signaling pathway non-canonical Wnt signaling pathway positive regulation of Wnt signaling pathway, planar cell polarity pathway regulation of Wnt signaling pathway, planar cell polarity pathway regulation of non-canonical Wnt signaling pathway regulation of growth regulation of cellular component organization growth negative regulation of cell growth regulation of cell growth cell growth cellular component organization negative regulation of growth cellular component organization or biogenesis cell death extrinsic apoptotic signaling pathway apoptotic signaling pathway apoptotic process programmed cell death negative regulation of intracellular signal transduction regulation of MAPK cascade negative regulation of ERK1 and ERK2 cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade negative regulation of MAPK cascade positive regulation of aldosterone metabolic process regulation of hormone biosynthetic process regulation of lipid metabolic process regulation of primary metabolic process positive regulation of metabolic process cellular ketone metabolic process regulation of small molecule metabolic process organic substance biosynthetic process positive regulation of lipid metabolic process small molecule metabolic process primary alcohol biosynthetic process regulation of biological quality positive regulation of aldosterone biosynthetic process hormone biosynthetic process regulation of steroid hormone biosynthetic process regulation of cellular ketone metabolic process regulation of alcohol biosynthetic process olefinic compound biosynthetic process regulation of hormone levels cellular metabolic process C21-steroid hormone biosynthetic process primary metabolic process regulation of cellular metabolic process organic cyclic compound metabolic process positive regulation of steroid biosynthetic process biosynthetic process organic cyclic compound biosynthetic process metabolic process positive regulation of hormone biosynthetic process regulation of aldosterone biosynthetic process regulation of metabolic process mineralocorticoid biosynthetic process regulation of steroid biosynthetic process positive regulation of steroid hormone biosynthetic process cellular biosynthetic process regulation of hormone metabolic process organic hydroxy compound metabolic process steroid metabolic process lipid biosynthetic process alcohol metabolic process positive regulation of cellular metabolic process aldehyde biosynthetic process C21-steroid hormone metabolic process mineralocorticoid metabolic process organic substance metabolic process positive regulation of biosynthetic process aldosterone metabolic process cellular aldehyde metabolic process steroid biosynthetic process steroid hormone biosynthetic process regulation of biosynthetic process aldosterone biosynthetic process small molecule biosynthetic process positive regulation of hormone metabolic process regulation of ketone biosynthetic process regulation of steroid metabolic process hormone metabolic process regulation of cellular biosynthetic process regulation of aldosterone metabolic process positive regulation of lipid biosynthetic process organic hydroxy compound biosynthetic process alcohol biosynthetic process positive regulation of steroid metabolic process olefinic compound metabolic process regulation of lipid biosynthetic process positive regulation of small molecule metabolic process positive regulation of alcohol biosynthetic process ketone biosynthetic process positive regulation of cellular biosynthetic process primary alcohol metabolic process lipid metabolic process positive regulation of proteasomal protein catabolic process catabolic process positive regulation of protein metabolic process proteolysis involved in protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process positive regulation of ubiquitin-dependent protein catabolic process regulation of proteolysis regulation of proteolysis involved in protein catabolic process modification-dependent macromolecule catabolic process proteolysis positive regulation of macromolecule metabolic process protein metabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process regulation of protein metabolic process proteasomal protein catabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of proteolysis involved in protein catabolic process positive regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process positive regulation of proteolysis regulation of proteasomal protein catabolic process positive regulation of proteasomal ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process macromolecule metabolic process organic substance catabolic process regulation of protein catabolic process positive regulation of substrate adhesion-dependent cell spreading regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of substrate adhesion-dependent cell spreading regulation of cell adhesion cell-substrate adhesion cell adhesion positive regulation of cell-substrate adhesion substrate adhesion-dependent cell spreading regulation of neuron projection development multicellular organismal process cell projection organization neuron projection development neurogenesis multicellular organism development neuron differentiation negative regulation of cell projection organization system development plasma membrane bounded cell projection organization negative regulation of cellular component organization regulation of cell projection organization nervous system development negative regulation of neuron projection development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization embryo development ending in birth or egg hatching chordate embryonic development embryo development in utero embryonic development positive regulation of JNK cascade JNK cascade positive regulation of MAPK cascade regulation of JNK cascade regulation of integrin-mediated signaling pathway positive regulation of integrin-mediated signaling pathway integrin-mediated signaling pathway anatomical structure morphogenesis cell morphogenesis response to organic substance response to lipid response to hormone response to steroid hormone response to chemical response to endogenous stimulus response to organic cyclic compound regulation of programmed cell death negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway negative regulation of programmed cell death regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic process regulation of apoptotic signaling pathway negative regulation of cellular metabolic process negative regulation of RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of cellular biosynthetic process regulation of gene expression negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of cell population proliferation regulation of cell population proliferation regulation of epithelial cell proliferation epithelial cell proliferation negative regulation of epithelial cell proliferation renal system process system process renal absorption renal protein absorption positive regulation of macromolecule biosynthetic process positive regulation of nucleobase-containing compound metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of RNA biosynthetic process import into cell regulation of localization positive regulation of cellular component organization transport vesicle-mediated transport localization positive regulation of endocytosis clathrin-dependent endocytosis positive regulation of receptor-mediated endocytosis regulation of endocytosis regulation of transport regulation of receptor-mediated endocytosis regulation of vesicle-mediated transport establishment of localization positive regulation of transport positive regulation of clathrin-dependent endocytosis receptor-mediated endocytosis endocytosis regulation of clathrin-dependent endocytosis regulation of aldosterone secretion positive regulation of steroid hormone secretion regulation of system process regulation of steroid hormone secretion aldosterone secretion mineralocorticoid secretion positive regulation of corticosteroid hormone secretion organic substance transport lipid transport regulation of corticosteroid hormone secretion regulation of secretion positive regulation of mineralocorticoid secretion endocrine hormone secretion positive regulation of lipid transport lipid export from cell positive regulation of multicellular organismal process regulation of mineralocorticoid secretion positive regulation of aldosterone secretion regulation of endocrine process corticosteroid hormone secretion regulation of hormone secretion steroid hormone secretion regulation of lipid transport positive regulation of secretion by cell organic hydroxy compound transport hormone secretion secretion by cell positive regulation of hormone secretion regulation of secretion by cell positive regulation of secretion signal release regulation of multicellular organismal process secretion lipid localization export from cell cell-cell signaling positive regulation of lipid localization endocrine process regulation of lipid localization macromolecule localization hormone transport cellular response to growth factor stimulus cellular response to transforming growth factor beta stimulus cellular response to endogenous stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway myeloid cell differentiation protein localization cellular localization regulation of protein localization negative regulation of protein localization to plasma membrane cellular macromolecule localization regulation of protein localization to membrane negative regulation of protein localization protein localization to cell periphery protein localization to plasma membrane localization within membrane regulation of protein localization to cell periphery protein localization to membrane negative regulation of protein localization to membrane regulation of cellular localization negative regulation of protein localization to cell periphery regulation of protein localization to plasma membrane regulation of epithelial to mesenchymal transition regulation of developmental process positive regulation of epithelial to mesenchymal transition regulation of cell differentiation mesenchyme development positive regulation of developmental process positive regulation of cell differentiation animal organ development tissue development epithelial to mesenchymal transition mesenchymal cell differentiation establishment of protein localization nitrogen compound transport protein transport receptor internalization regulation of receptor internalization positive regulation of receptor internalization regulation of receptor recycling receptor recycling receptor metabolic process positive regulation of receptor recycling positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion clathrin coat assembly cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly epithelium development leading edge cell differentiation epithelial cell differentiation positive regulation of early endosome to late endosome transport establishment of localization in cell positive regulation of intracellular transport regulation of intracellular transport intracellular transport endosomal transport vesicle-mediated transport between endosomal compartments regulation of early endosome to late endosome transport early endosome to late endosome transport positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of phosphate metabolic process positive regulation of protein modification process regulation of phosphate metabolic process phosphate-containing compound metabolic process positive regulation of protein phosphorylation phosphorus metabolic process protein modification process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation macromolecule modification regulation of phosphorus metabolic process regulation of phosphorylation regulation of DNA-templated transcription elongation regulation of transcription elongation by RNA polymerase II transcription elongation by RNA polymerase II positive regulation of transcription elongation by RNA polymerase II positive regulation of DNA-templated transcription, elongation DNA-templated transcription elongation cellular response to epidermal growth factor stimulus response to epidermal growth factor intracellular receptor signaling pathway hormone-mediated signaling pathway negative regulation of intracellular steroid hormone receptor signaling pathway regulation of intracellular steroid hormone receptor signaling pathway cellular response to organic substance androgen receptor signaling pathway cellular response to steroid hormone stimulus cellular response to hormone stimulus cellular response to organic cyclic compound regulation of androgen receptor signaling pathway cellular response to chemical stimulus steroid hormone mediated signaling pathway cellular response to lipid nuclear receptor signaling pathway negative regulation of androgen receptor signaling pathway intracellular steroid hormone receptor signaling pathway	clathrin-coated pit membrane cellular anatomical entity endomembrane system intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle intracellular organelle coated vesicle membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane clathrin-coated pit membrane cellular anatomical entity endomembrane system intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle intracellular organelle coated vesicle membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle clathrin-coated vesicle coated vesicle vesicle organelle membrane clathrin-coated vesicle membrane perinuclear region of cytoplasm protein-containing complex plasma membrane protein complex plasma membrane membrane protein complex coated membrane clathrin coat membrane coat cell periphery clathrin coat of coated pit apical part of cell plasma membrane region apical plasma membrane nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen fibrillar center intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR048559	Disabled homolog 1/2, sulfatide-binding motif	Conserved Site
A, B, C	IPR011993	PH-like domain superfamily	Homologous Superfamily
A, B, C	IPR006020	PTB/PI domain	Domain
A, B, C	IPR048561	Disabled, phosphotyrosine-binding domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.