Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyHpcH/HpaI aldolase8031279 4003274 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPhosphoenolpyruvate/pyruvate domain8043657 3000510 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPhosphoenolpyruvate/pyruvate domain8043657 3000510 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03328e1dxeA1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PF03328ECOD (1.6)
BPF03328e1dxeB1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PF03328ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.60 Alpha Beta Alpha-Beta Barrel TIM Barrel Phosphoenolpyruvate-binding domainsCATH (4.3.0)
B3.20.20.60 Alpha Beta Alpha-Beta Barrel TIM Barrel Phosphoenolpyruvate-binding domainsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF03328HpcH/HpaI aldolase/citrate lyase family (HpcH_HpaI)HpcH/HpaI aldolase/citrate lyase family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
2-DEHYDRO-3-DEOXY-GALACTARATE ALDOLASE

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
2-dehydro-3-deoxyglucarate aldolase  M-CSA #846

5-keto-4-deoxy-D-glucarate aldolase GarL is involved in step 2 of the subpathway that synthesizes D-glycerate from galactarate. It catalyses the reversible retro-aldol cleavage of both 5-keto-4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde.

Defined by 5 residues: HIS:A-50ARG:A-75ASP:A_2-89GLU:A-153ASP:A-179
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Explore in 3DM-CSA Motif Definition