Macromolecule Content

Total Structure Weight: 142608.08
Atom Count: 8374
Residue Count: 1284
Unique protein chains: 1

5Z3Q

Crystal Structure of a Soluble Fragment of Poliovirus 2C ATPase (2.55 Angstrom)

DOI: 10.2210/pdb5Z3Q/pdb

Classification: VIRAL PROTEIN
Organism(s): Poliovirus type 1 (strain Mahoney)
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Mutation(s): 3

Deposited: 2018-01-08 Released: 2018-09-12
Deposition Author(s): Guan, H., Tian, J., Zhang, C., Qin, B., Cui, S.
Funding Organization(s): National Natural Science Foundation of China

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.545 Å
R-Value Free: 0.265
R-Value Work: 0.202

wwPDB Validation3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of a soluble fragment of poliovirus 2CATPase

Guan, H., Tian, J., Zhang, C., Qin, B., Cui, S.

(2018) PLoS Pathog. 14: e1007304-e1007304

PubMed: 30231078 Search on PubMed

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
PV-2C	B, A, D, C, E, H	214	Poliovirus type 1 (strain Mahoney)	Mutation(s): 3
Find proteins for P03300 (Poliovirus type 1 (strain Mahoney)) Go to UniProtKB: P03300
Protein Feature View Full Protein Feature View for P03300

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions	3D Interactions
PO4 Query on PO4 Download SDF File Download CCD File	A, B, D	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Ligand Interaction
ZN Query on ZN Download SDF File Download CCD File	A, B, C, D, E, H	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.545 Å
R-Value Free: 0.265
R-Value Work: 0.202
Space Group: P 1 2₁ 1

Unit Cell:

Length (Å)	Angle (°)
a = 52.698	α = 90.00
b = 84.073	β = 94.21
c = 172.562	γ = 90.00

Software Package:

Software Name	Purpose
XDS	data reduction
XDS	data scaling
PHENIX	refinement
PHASER	phasing

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History & Funding Information

Deposition Data

Deposited Date: 2018-01-08
Released Date: 2018-09-12
Deposition Author(s): Guan, H., Tian, J., Zhang, C., Qin, B., Cui, S.

Funding Organization	Location	Grant Number
National Natural Science Foundation of China	China	81572005

Revision History

Version 1.0: 2018-09-12
Type: Initial release
Version 1.1: 2018-10-03
Type: Data collection, Database references

The RCSB PDB is funded by a grant (DBI-1338415) from the National Science Foundation, the National Institutes of Health, and the US Department of Energy.