Download MendeleyCrystal structure of spermidine inhibited Ribosome inactivating protein from Momordica balsamina
Yamini, S., Pandey, S., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.To be published.
4LRO
Crystal structure of spermidine inhibited Ribosome inactivating protein from Momordica balsamina
- DOI: 10.2210/pdb4LRO/pdb
- Classification: HYDROLASE
- Organism(s): Momordica balsamina
- Mutation(s): No
- Deposited: 2013-07-20 Released: 2013-08-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.98 Å
- R-Value Free: 0.197
- R-Value Work: 0.169
- R-Value Observed: 0.170
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | A | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | Ligand Interaction | |
| SPD Query on SPD | A | SPERMIDINE C7 H19 N3 ATHGHQPFGPMSJY-UHFFFAOYSA-N |  | Ligand Interaction | |
| GOL Query on GOL | A | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.98 Å
- R-Value Free: 0.197
- R-Value Work: 0.169
- R-Value Observed: 0.170
- Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 130.152 | α = 90 |
| b = 130.152 | β = 90 |
| c = 40.059 | γ = 120 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| AMoRE | phasing |
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Deposited Date: 2013-07-20
- Released Date: 2013-08-07 Deposition Author(s): Yamini, S., Pandey, S., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.
