Download MendeleyCrystal structure of a nucleoporin 35kDa (NUP35) from Homo sapiens at 2.46 A resolution
Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)To be published.
4LIR
Crystal structure of a nucleoporin 35kDa (NUP35) from Homo sapiens at 2.46 A resolution
- DOI: 10.2210/pdb4LIR/pdb
- Classification: TRANSPORT PROTEIN, NUCLEAR PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2013-07-03 Released: 2013-09-11
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.46 Å
- R-Value Free: 0.206
- R-Value Work: 0.191
- R-Value Observed: 0.192
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Nucleoporin NUP53 | A, B | 117 | Homo sapiens | Mutation(s): 0 Gene Names: BC047029, MP44, NUP35, NUP53 |  |
Find proteins for Q8NFH5 (Homo sapiens) Explore Q8NFH5 Go to UniProtKB: Q8NFH5 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: Q8NFH5 GTEx: ENSG00000163002 | |||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A,B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.46 Å
- R-Value Free: 0.206
- R-Value Work: 0.191
- R-Value Observed: 0.192
- Space Group: P 65 2 2
- Diffraction Data DOI: 10.18430/M34LIR Protein Diffraction
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 70.59 | α = 90 |
| b = 70.59 | β = 90 |
| c = 160.19 | γ = 120 |
| Software Name | Purpose |
|---|---|
| MolProbity | model building |
| PDB_EXTRACT | data extraction |
| SHELX | phasing |
| SHARP | phasing |
| SCALA | data scaling |
| BUSTER-TNT | refinement |
| MOSFLM | data reduction |
| SHELXD | phasing |
| BUSTER | refinement |
Entry History
Deposition Data
- Deposited Date: 2013-07-03
- Released Date: 2013-09-11 Deposition Author(s): Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Revision History (Full details and data files)
- Version 1.0: 2013-09-11
Type: Initial release - Version 1.1: 2017-11-15
Changes: Refinement description - Version 1.2: 2018-01-24
Changes: Database references
