4RNC

Crystal structure of an esterase RhEst1 from Rhodococcus sp. ECU1013


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.161 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Substrate channel evolution of an esterase for the synthesis of Cilastatin

Luan, Z.J.L Li, F.Dou, S.Chen, Q.Kong, X.D.Zhou, J.Yu, H.L.Xu, J.H.

(2015) CATALYSIS SCIENCE AND TECHNOLOGY 5: 2622-2629


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Esterase
A, B, C
310Rhodococcus sp. ECU1013Mutation(s): 0 
Gene Names: EST1
EC: 3.1.1.1
Find proteins for A0A088CB91 (Rhodococcus sp. ECU1013)
Go to UniProtKB:  A0A088CB91
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, B, C
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.161 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 212.926α = 90.00
b = 45.383β = 105.82
c = 77.443γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
HKL-2000data collection
DENZOdata reduction
PHASESphasing
HKL-2000data scaling
REFMACrefinement
SCALEPACKdata scaling
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-10-28
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Refinement description