4IM2

Structure of Tank-Binding Kinase 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5001 Å
  • R-Value Free: 0.255 
  • R-Value Work: 0.197 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure of Tank-Binding Kinase 1

Tu, D.Zhu, Z.Zhou, A.Y.Yun, C.Lee, K.Toms, A.V.Li, Y.Dunn, G.P.Chan, E.Thai, T.Yang, S.Ficarro, S.B.Marto, J.A.Jeon, H.Hahn, W.C.Barbie, D.A.Eck, M.J.

(2013) Cell.Reports. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Serine/threonine-protein kinase TBK1
A
663Homo sapiensMutations: D141N
Gene Names: TBK1 (NAK)
EC: 2.7.11.1
Find proteins for Q9UHD2 (Homo sapiens)
Go to Gene View: TBK1
Go to UniProtKB:  Q9UHD2
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
BX7
Query on BX7

Download SDF File 
Download CCD File 
A
N-(3-{[5-iodo-4-({3-[(thiophen-2-ylcarbonyl)amino]propyl}amino)pyrimidin-2-yl]amino}phenyl)pyrrolidine-1-carboxamide
C23 H26 I N7 O2 S
VAVXGGRQQJZYBL-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5001 Å
  • R-Value Free: 0.255 
  • R-Value Work: 0.197 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 133.924α = 90.00
b = 133.924β = 90.00
c = 85.559γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data scaling
PHENIXrefinement
HKL-2000data reduction
HKL-2000data collection
SHARPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2013-01-01 
  • Released Date: 2013-03-06 
  • Deposition Author(s): Tu, D., Eck, M.J.

Revision History 

  • Version 1.0: 2013-03-06
    Type: Initial release
  • Version 1.1: 2013-03-20
    Type: Derived calculations