Crystal structure of the complex of type I Ribosome inactivating protein complexed with Trehalose at 1.70 A resolution
Yamini, S., Pandey, S., Kushwaha, G.S., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ribosome inactivating protein | A | 246 | Momordica balsamina | Mutation(s): 0  Gene Names: RIP EC: 3.2.2.22 | ![]() |
Find proteins for D9J2T9 (Momordica balsamina) Explore D9J2T9  Go to UniProtKB:  D9J2T9 | |||||
Protein Feature ViewExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Chain Length | 2D Diagram | Glycosylation | 3D Interactions |
alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose | B | 2 | | N/A | Oligosaccharides Interaction |
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | A | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | Ligand Interaction | ||
GOL Query on GOL | A | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | Ligand Interaction |
Entity ID: 2 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900006 Query on PRD_900006 | B | trehalose | Oligosaccharide /  Nutrient | -- |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 130.204 | α = 90 |
b = 130.204 | β = 90 |
c = 40.148 | γ = 120 |
Software Name | Purpose |
---|---|
HKL-2000 | data collection |
AMoRE | phasing |
REFMAC | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |