3HP3

Crystal structure of CXCL12


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.228 
  • R-Value Observed: 0.229 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Heterologous quaternary structure of CXCL12 and its relationship to the CC chemokine family

Murphy, J.W.Yuan, H.Kong, Y.Xiong, Y.Lolis, E.J.

(2009) Proteins 78: 1331-1337


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
CXCL12 proteinABCDEFGHABCDEFGHIJ
68Homo sapiensMutation(s): 0 
Gene Names: CXCL12hCG_25667SDF1SDF1ASDF1B
Find proteins for P48061 (Homo sapiens)
Explore P48061 
Go to UniProtKB:  P48061
NIH Common Fund Data Resources
PHAROS:  P48061
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.228 
  • R-Value Observed: 0.229 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 41.834α = 90
b = 117.468β = 90
c = 134.501γ = 90
Software Package:
Software NamePurpose
CBASSdata collection
SHARPphasing
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-01-26
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2018-05-30
    Changes: Advisory, Data collection, Derived calculations