2AXM
HEPARIN-LINKED BIOLOGICALLY-ACTIVE DIMER OF FIBROBLAST GROWTH FACTOR
- PDB DOI: https://doi.org/10.2210/pdb2AXM/pdb
- Classification: GROWTH FACTOR
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No 
- Deposited: 1997-10-20 Released: 1998-04-22 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.307 
- R-Value Work: 0.218 
- R-Value Observed: 0.218 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ACIDIC FIBROBLAST GROWTH FACTOR | 135 | Homo sapiens | Mutation(s): 0  Gene Names: ECGF | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P05230 (Homo sapiens) Explore P05230  Go to UniProtKB:  P05230 | |||||
PHAROS:  P05230 GTEx:  ENSG00000113578  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P05230 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose | C | 6 | N/A | ||
Glycosylation Resources | |||||
GlyTouCan:  G30141AL GlyCosmos:  G30141AL |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.307 
- R-Value Work: 0.218 
- R-Value Observed: 0.218 
- Space Group: P 61 2 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 91.1 | α = 90 |
b = 91.1 | β = 90 |
c = 193.9 | γ = 120 |
Software Name | Purpose |
---|---|
X-PLOR | model building |
X-PLOR | refinement |
DENZO | data reduction |
CCP4 | data scaling |
ROTAVATA | data scaling |
X-PLOR | phasing |
Entry History 
Deposition Data
- Released Date: 1998-04-22  Deposition Author(s): Digabriele, A.D., Lax, I., Chen, D.I., Svahn, C.M., Jaye, M., Schlessinger, J., Hendrickson, W.A.
Revision History (Full details and data files)
- Version 1.0: 1998-04-22
Type: Initial release - Version 1.1: 2008-03-10
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Other, Refinement description, Structure summary - Version 2.1: 2023-08-09
Changes: Database references, Refinement description, Structure summary