1RML

NMR STUDY OF ACID FIBROBLAST GROWTH FACTOR BOUND TO 1,3,6-NAPHTHALENE TRISULPHONATE, 26 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 26 
  • Conformers Submitted: 26 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Solution structure of acidic fibroblast growth factor bound to 1,3, 6-naphthalenetrisulfonate: a minimal model for the anti-tumoral action of suramins and suradistas.

Lozano, R.M.Jimenez, M.Santoro, J.Rico, M.Gimenez-Gallego, G.

(1998) J Mol Biol 281: 899-915

  • DOI: 10.1006/jmbi.1998.1977
  • Primary Citation of Related Structures:  
    1RML

  • PubMed Abstract: 
  • Recent data show that anti-angiogenesis may provide a promising route to treat cancer. Fibroblast growth factors (FGFs) are powerful angiogenic polypeptides, whose mitogenic activity requires the presence of heparin-like compounds. It has been shown that ...

    Recent data show that anti-angiogenesis may provide a promising route to treat cancer. Fibroblast growth factors (FGFs) are powerful angiogenic polypeptides, whose mitogenic activity requires the presence of heparin-like compounds. It has been shown that angiogenesis promoted by FGFs on inhibition by monoclonal antibodies and antisense targeting can also inhibit tumour growth. Derivatives of suramin, a polysulfonated binaphthyl urea and binaphthylsulfonated derivatives of distamycin, suradistas, constitute an important group of potential anti-cancer agents. These compounds compete with heparin in forming tight complexes with FGFs. This inhibits the recognition of these growth factors by their tyrosine kinase membrane receptors thereby suppressing their angiogenic activity. Here we show that 1,3,6-naphthalenetrisulfonate, a common chemical function of the suramins and suradistas with the highest anti-angiogenic activity inhibits the mitogenic activity of acidic fibroblast growth factor, and that this inhibition is relieved by increasing concentrations of heparin in the assay. We have also solved the three-dimensional structure in solution of the protein complexed to this compound. The structural data provide clues that may help in understanding the inhibitory effect of suramins and suradistas, and could contribute to the development of new anti-tumoral drugs.


    Related Citations: 
    • Three-Dimensional Structure of Acidic Fibroblast Growth Factor in Solution: Effects of Binding to a Heparin Functional Analog
      Pineda-Lucena, A., Jimenez, M.A., Lozano, R.M., Nieto, J.L., Santoro, J., Rico, M., Gimenez-Gallego, G.
      (1996) J Mol Biol 264: 162
    • 1H-NMR Assignment and Solution Structure of Human Acidic Fibroblast Growth Factor Activated by Inositol Hexasulfate
      Pineda-Lucena, A., Jimenez, M.A., Nieto, J.L., Santoro, J., Rico, M., Gimenez-Gallego, G.
      (1994) J Mol Biol 242: 81
    • Erratum. 1H-NMR Assignment and Solution Structure of Human Acidic Fibroblast Growth Factor Activated by Inositol Hexasulfate
      Pineda-Lucena, A., Jimenez, M.A., Nieto, J.L., Santoro, J., Rico, M., Gimenez-Gallego, G.
      (1994) J Mol Biol 244: 251

    Organizational Affiliation

    Centro de Investigaciones Biológicas (C.S.I.C.), Velázquez 144, Madrid, 28006, Spain.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
ACIDIC FIBROBLAST GROWTH FACTOR A155Homo sapiensMutation(s): 0 
Gene Names: FGF1FGFA
Find proteins for P05230 (Homo sapiens)
Explore P05230 
Go to UniProtKB:  P05230
NIH Common Fund Data Resources
PHAROS:  P05230
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NTS
Query on NTS

Download Ideal Coordinates CCD File 
A
NAPHTHALENE TRISULFONATE
C10 H5 O9 S3
ZPBSAMLXSQCSOX-UHFFFAOYSA-K
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
NTSKd:  474000   nM  BindingDB
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 26 
  • Conformers Submitted: 26 
  • OLDERADO: 1RML Olderado

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1998-11-11
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance