Download MendeleyCrystal structure of Glycine cleavage system H protein (tm0212) from Thermotoga maritima at 1.65 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
1ZKO
Crystal structure of Glycine cleavage system H protein (tm0212) from Thermotoga maritima at 1.65 A resolution
- DOI: 10.2210/pdb1ZKO/pdb
- Classification: Glycine cleavage H-protein
- Organism(s): Thermotoga maritima
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2005-05-03 Released: 2005-05-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.270
- R-Value Work: 0.225
- R-Value Observed: 0.227
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glycine cleavage system H protein | A, B | 136 | Thermotoga maritima | Mutation(s): 2 Gene Names: gcvH |  |
Find proteins for Q9WY55 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)) Explore Q9WY55 Go to UniProtKB: Q9WY55 | |||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NA Query on NA | A | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A,B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.270
- R-Value Work: 0.225
- R-Value Observed: 0.227
- Space Group: P 21 21 21
- Diffraction Data DOI: 10.18430/M31ZKO Protein Diffraction
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.95 | α = 90 |
| b = 65.249 | β = 90 |
| c = 69.14 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| SCALA | data scaling |
| PDB_EXTRACT | data extraction |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| autoSHARP | phasing |
| SHELXL | refinement |
Entry History
Deposition Data
- Deposited Date: 2005-05-03
- Released Date: 2005-05-10 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
