Macromolecule Content

Total Structure Weight: 16.33 kDa
Atom Count: 1184
Modelled Residue Count: 127
Deposited Residue Count: 136
Unique protein chains: 1

1J5U

CRYSTAL STRUCTURE OF AN ARCHEASE, POSSIBLE CHAPERONE (TM1083) FROM THERMOTOGA MARITIMA AT 2.0 A RESOLUTION

DOI: 10.2210/pdb1J5U/pdb

Classification: CHAPERONE
Organism(s): Thermotoga maritima
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2002-07-03 Released: 2002-07-31
Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.271
R-Value Work: 0.212
R-Value Observed: 0.212

wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

Crystal structure of archease, possible chaperone (TM1083) from Thermotoga maritima at 2.0 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
archease, possible chaperone	A	136	Thermotoga maritima	Mutation(s): 0 Gene Names: TM1083
Find proteins for Q9X0H1 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)) Explore Q9X0H1 Go to UniProtKB: Q9X0H1
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CA Query on CA Download Ideal Coordinates CCD File SDF format, chain B [A] MOL2 format, chain B [A]	A	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Ligand Interaction

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.271
R-Value Work: 0.212
R-Value Observed: 0.212
Space Group: P 4₃ 3 2
Diffraction Data DOI: 10.18430/M31J5U Protein Diffraction

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 105.28	α = 90
b = 105.28	β = 90
c = 105.28	γ = 90

Software Package:

Software Name	Purpose
MOSFLM	data reduction
SCALA	data scaling
CCP4	data reduction
CCP4	model building
SOLVE	phasing
RESOLVE	model building
CNS	refinement
CCP4	data scaling
CCP4	phasing
RESOLVE	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2002-07-03
Released Date: 2002-07-31

Deposition Author(s):

Joint Center for Structural Genomics (JCSG)

Revision History (Full details and data files)

Version 1.0: 2002-07-31
Type: Initial release
Version 1.1: 2008-04-26
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2017-10-04
Changes: Refinement description
Version 1.4: 2018-07-18
Changes: Data collection, Database references

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.