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Molecular Function Browser

Searches or browses for structure by Gene Ontology Molecular Function terms. Molecular Function terms are a set of controlled vocabulary terms defined by the Gene Ontology project (http://www.geneontology.org).

The Molecular Function Browser permits the user to navigate through the Molecular Function hierarchy to arrive at the subset of particular interest. The browser opens up the top level in the hierarchy. Clicking on the arrow/folder icons expands the respective nodes. Clicking on the name of the node will retrieve all PDB IDs assigned to that node.

Important: Make sure pop-ups are enabled in your browser (Click here to check).

Examples

  1. Search by a term

    Protein Kinase Activity

    Type Protein Kinase Activity in the text box above the tree and click the "Find in Tree" button. To see the number of structures related to Protein Kinase Activity. Click on the name to retrieve a list of these structures.

  2. Browse the molecular process tree

    Kinase Regulator Activity

    Mouse over enzyme regulator activity to see the number of structures that belong to this category. Expand this node and navigate to kinase regulator activity. Mouse over electron kinase regulator activity to see how many structures have been assigned to this term. Click on the name to retrieve this set of structures.