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Summaries of PDB Data

Various summaries of current data in the PDB archive are available through the /pub/pdb/derived_data directory of the FTP site. Links to and descriptions of these files are available below.



File name Description
author.idx
List of all PDB ID codes and entry authors.
cmpd_res.idx
List of all PDB ID codes, resolution and compound names.
compound.idx
List of all PDB ID codes and compound names.
crystal.idx
List of all PDB ID codes and crystal unit cell parameters from the CRYST1 record.
entries.idx List of all PDB ID codes, header accession date, compound, source, author list, resolution and experiment type (if not X-ray).
on_hold.list List of all entries that are on-hold
pdb_entry_type.txt
List of all PDB entries, identification of each as a protein, nucleic acid, or protein-nucleic acid complex and whether the structure was determined by diffraction or NMR.
pdb_seqres.txt and pdb_seqres.txt.gz
Listing of all PDB sequences in FASTA format.
pending_waiting.list List of all entries that are to be released upon publication.
resolu.idx
List of all PDB ID codes and data resolution values. Resolution value is -1.00 for entries determined by NMR.
source.idx List of all PDB ID codes and source names as found in the compound records.


In addition, /pub/pdb/data/status/obsolete.dat contains a list of obsolete coordinate entries and their successors (superseding entries).