RPM1-interacting protein 4 - Q8GYN5 (RIN4_ARATH)


Protein Feature View of PDB entries mapped to a UniProtKB sequence  

  • Number of PDB entries for Q8GYN5: 1
Essential regulator of plant defense, which plays a central role in resistance in case of infection by a pathogen. It is a common target for both type III avirulence proteins from P.syringae (AvrB, AvrRpm1 and AvrRpt2) and for the plant Resistance (R) proteins RPM1 and RPS2. In strains carrying the appropriate R gene for avirulence proteins of the pathogen, its association with avirulence proteins triggers a defense system including the hypersensitive response, which limits the spread of disease. In contrast, in plants lacking appropriate R genes, its association with avirulence proteins of the pathogen impairs the defense system and leads to the pathogen multiplication. UniProt
Pathway Maps
      ESCHER  BiGG
Subunit Structure
Interacts with the unrelated avirulence proteins AvrB, AvrRpm1 and AvrRpt2 from P.syringae. Interacts with the N-terminal domain of PRM1. Interacts indirectly with RPS2. Its association with AvrB and AvrRpm1 results in its phosphorylation, which is in turn recognized by the resistance RPM1 protein, leading to the activation of RPM1-dependent disease resistance responses. On the other hand, its association with AvrRpt2 results in its destruction, which activates RPS2-dependent disease resistance responses. Interacts (via C-terminus) with NDR1. Interaction with NDR1 is required for association with RPS2 and RPS2-mediated resistance (PubMed:11955429, PubMed:12581526, PubMed:12581527, PubMed:15746386, PubMed:17012600, PubMed:17397263). Interacts with RIPK (PubMed:21320696). UniProt
  • Organism: Mouse-ear cress
  • Length:
  • UniProt
  • Other Gene names: RIN4, At3g25070, MJL12_1
This protein in other organisms (by gene name):
The Protein Feature View requires a browser that supports SVG (Scalable Vector Graphics). Mouse over tracks and labels for more information.
Data origin/color codes
The vertical color bar on the left side indicates data provenance.
Data in green originates from UniProtKB  
Variation data (sourced from UniProt) shows non-genetic variation from the ExPASy   and dbSNP   websites.
Data in yellow originates from Pfam  , by interacting with the HMMER3 web site  
Data in purple originates from Phosphosite  .
Data in orange originates from the SCOP   (version 1.75) and SCOPe   (version 2.04) classifications.
Data in grey has been calculated using BioJava  . Protein disorder predictions are based on JRONN (Troshin, P. and Barton, G. J. unpublished), a Java implementation of RONN  
  • Red: potentially disorderd region
  • Blue: probably ordered region.
Hydropathy has been calculated using a sliding window of 15 residues and summing up scores from standard hydrophobicity tables.
  • Red: hydrophobic
  • Blue: hydrophilic.
Data in lilac represent the genomic exon structure projected onto the UniProt sequence.
Data in blue originates from PDB
  • Secstruc: Secondary structure projected from representative PDB entries onto the UniProt sequence.
Sequence Mismatches It is now possible to see information about expression tags, cloning artifacts, and many other details related to sequence mismatches.
Icons represent a number of different sequence modifications that can be observed in PDB files. For example the 'T' icon T represents expression tags that have been added to the sequence. The 'E' icon E represents an engineered mutation. However, besides these two, there are many other icons. For more information about the meaning and exact position of a sequence modification, move the cursor over the icon.
Validation Track

For more details on the Validation Track (Structure Summary Page only) see the dedicated help page.

Data in red indicates combined ranges of Homology Models from SBKB   and the Protein Model Portal  
The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
Organism icons generated by flaticon.com under CC BY. The authors are: Freepik, Icons8, OCHA, Scott de Jonge.

For more details on the Protein Feature view see the dedicated help page.