RNA polymerase sigma factor - Q0P6M2 (Q0P6M2_ECOLX)


Protein Feature View of PDB entries mapped to a UniProtKB sequence  

Number of PDB entries for Q0P6M2: 1
Gene names: rpoE BC97_10805 BC99_05540 BN17_18601 BU34_22545 BU65_01430 BU66_01490 BU67_03840 BU68_01125 BU69_10490 CF57_07525 CF58_21975 CF59_21950 CF60_21615 CF61_08210 DA88_11690 DC22_19415 DC24_14495 DH22_1167 DO98_12640 DP79_24870 ECs3439 LF82_1962 PGD_00662
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Data origin/color codes
The vertical color bar on the left side indicates data provenance.
Data in green originates from UniProtKB  
Data in yellow originates from Pfam  , by interacting with the HMMER3 web site  
Data in orange originates from the SCOP   (version 1.75) and SCOPe   (version 2.04) classifications.
Data in grey has been calculated using BioJava  . Protein disorder predictions are based on JRONN (Troshin, P. and Barton, G. J. unpublished), a Java implementation of RONN  
  • Red: potentially disorderd region
  • Blue: probably ordered region.
Hydropathy has been calculated using a sliding window of 15 residues and summing up scores from standard hydrophobicity tables.
  • Red: hydrophobic
  • Blue: hydrophilic.
Data in lilac represent the genomic exon structure projected onto the UniProt sequence.
Data in blue originates from PDB
  • Secstruc: Secondary structure projected from representative PDB entries onto the UniProt sequence.
Data in red indicates combined ranges of Homology Models from SBKB   and the Protein Model Portal  

The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).