Guanyl-specific ribonuclease pgl-1 - E3M3V1 (PGL1_CAERE)

 

Protein Feature View of PDB entries mapped to a UniProtKB sequence  

  • Number of PDB entries for E3M3V1: 2
 
Function
Guanyl-specific endoribonuclease which cleaves the phosphodiester bond in single-stranded RNA between the 3'-guanylic residue and the 5'-OH residue of adjacent nucleotide, resulting in the formation of a corresponding 2',3'-cyclic phosphate intermediate (PubMed:26787882). Essential role in male and female postembryonic germline development; maternally provided protein maintains a population of proliferating germ cells and zygotic expression is required for correct oogenesis (By similarity). Together with the P-granule component pgl-3, is involved in the formation of P-granules (By similarity). Together with pgl-3, probably recruits other granule components such as pos-1, mex-3 and glh-1 to P-granules (By similarity). In addition, may act redundantly with pgl-3 to protect germ cells from excessive germline apoptosis during normal oogenesis and development of the two gonadal arms (By similarity). This may in part be through regulating the localization of sir-2.1 which is involved in germ cell apoptosis (By similarity). May protect somatic cells from excessive apoptosis during normal development. UniProt
Catalytic Activity
Two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides ending in G-P with 2',3'-cyclic phosphate intermediates. UniProt
Pathway Maps
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Subunit Structure
Homodimer (PubMed:26787882). Interacts with pgl-2 and pgl-3; this association is not required for P-granule localization of either pgl-2 or pgl-3 (By similarity). Interacts with ife-1 (By similarity). Interacts with prmt-1; the interaction is direct. UniProt
Domain
The RNA-binding RGG-box is required for the recruitment of some P-granule components such as pos-1 and probably mRNA, but is dispensable for granule formation. UniProt
  • Organism: Caenorhabditis vulgaris
  • Length:
  • UniProt
  • Other Gene names: pgl-1, CRE_08178
This protein in other organisms (by gene name):
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Data in green originates from UniProtKB  
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Data in grey has been calculated using BioJava  . Protein disorder predictions are based on JRONN (Troshin, P. and Barton, G. J. unpublished), a Java implementation of RONN  
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Data in lilac represent the genomic exon structure projected onto the UniProt sequence.
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  • Secstruc: Secondary structure projected from representative PDB entries onto the UniProt sequence.
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The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
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