UDP is found in 312 entries

UDP in polymers: 1 entries. Examples include: 2AIZ,

UDP as free ligands, exist in 311 entries. Examples include 1BGU, 1C3J, 1F6D

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo

Chemical Component Summary

Identifiers uridine 5'-(trihydrogen diphosphate)
[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate
Formula C9 H14 N2 O12 P2
Molecular Weight 404.16 g/mol
Type RNA linking
Isomeric SMILES O[C@@H]1[C@@H](CO[P@](O)(=O)OP(O)(O)=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O
InChI InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1

Chemical Details

Formal Charge 0
Atom Count 39
Chiral Atom Count 4
Chiral Atoms C1' C2' C3' C4'
Bond Count 40
Aromatic Bond Count 0
Leaving Atoms O2B

Drug Info: DrugBank

DrugBank ID DB03435   (Different stereochemistry)
Name Uridine-5'-Diphosphate
Groups experimental
Description A uracil nucleotide containing a pyrophosphate group esterified to C5 of the sugar moiety. [PubChem]
Brand Names
CAS number 58-98-0
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID: 21059682