GDP

GUANOSINE-5'-DIPHOSPHATE

GDP is found in 826 entries

GDP in polymers: 25 entries. Examples include: 1D4R, 1E8O, 1RY1

GDP as free ligands, exist in 801 entries. Examples include 1A2K, 1A4R, 1AA9

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo

Chemical Component Summary

Name GUANOSINE-5'-DIPHOSPHATE
Identifiers guanosine 5'-(trihydrogen diphosphate)
[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate
Formula C10 H15 N5 O11 P2
Molecular Weight 443.20 g/mol
Type RNA linking
Isomeric SMILES Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](CO[P@@](O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O
InChI InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChI Key QGWNDRXFNXRZMB-UUOKFMHZSA-N

Chemical Details

Formal Charge 0
Atom Count 43
Chiral Atom Count 4
Chiral Atoms C4' C3' C2' C1'
Bond Count 45
Aromatic Bond Count 5
Leaving Atoms HO3'

Drug Info: DrugBank

DrugBank ID DB04315   (Different stereochemistry)
Name Guanosine-5'-Diphosphate
Groups experimental
Description A guanine nucleotide containing two phosphate groups esterified to the sugar moiety. [PubChem]
Synonyms
Brand Names
CAS number 146-91-8

Drug Targets

Name Sequence Search Pharmacological Action Actions
Protein-glutamine gamma-glutamyltransferase 2 MAEELVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNY... unknown
GTPase HRas MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGET... unknown
Ras-related C3 botulinum toxin substrate 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP... unknown
Ras-related C3 botulinum toxin substrate 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP... unknown
Transforming protein RhoA MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG... unknown
View More Drug Targets
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID: 21059682