RCSB PDB - Ligand Summary

RCSB PDB
Deposit
- Prepare Data
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validate Data
- Validation Server
- Information for Journals
- Validation Task Forces
- Deposit Data
- wwPDB Deposition & Annotation System
- X-ray
- Legacy Deposition
- ADIT
- EmDep (EM)
- ADIT-NMR
- Deposition Help & Resources
- Deposit FAQ
- Tutorials
- Annotation Policies
- Processing Procedures
- PDBx/mmCIF Dictionary
- PDB Format Guide
- BioSync Beamlines / Facilities
- Related Tools
Search
Visualize
Analyze
Download
Learn
More
Username Password
Forget your Password?
Register a New Account

An Information Portal to 106082 Biological Macromolecular Structures

Advanced Search | Browse by Annotations

This browser is either not Javascript enabled or has it turned off.
This site will not function correctly without Javascript.

N-[(1S,2R)-1-benzyl-2-hydroxy-3-{[3-(trifluoromethyl)benzyl]amino}propyl]-7-ethyl-1-methyl-3,4-dihydro-1H-[1,2,5]thiadiazepino[3,4,5-hi]indole-9-carboxamide 2,2-dioxide

CM7 is found in 1 entries

CM7

Display Files

Structure Data File
mmCIF component definition

Download Files

Structure Data File
mmCIF component definition

Chemical Component Summary

Hide

Name	N-[(1S,2R)-1-benzyl-2-hydroxy-3-{[3-(trifluoromethyl)benzyl]amino}propyl]-7-ethyl-1-methyl-3,4-dihydro-1H-[1,2,5]thiadiazepino[3,4,5-hi]indole-9-carboxamide 2,2-dioxide
Identifiers
Formula	C₃₂ H₃₅ F₃ N₄ O₄ S
Molecular Weight	628.71 g/mol
Type	non-polymer
Isomeric SMILES	CCc1cn2CCS(=O)(=O)N(C)c3cc(cc1c23)C(=O)N[C@@H](Cc1ccccc1)[C@H](O)CNCc1cccc(c1)C(F)(F)F
InChI	InChI=1S/C32H35F3N4O4S/c1-3-23-20-39-12-13-44(42,43)38(2)28-17-24(16-26(23)30(28)39)31(41)37-27(15-21-8-5-4-6-9-21)29(40)19-36-18-22-10-7-11-25(14-22)32(33,34)35/h4-11,14,16-17,20,27,29,36,40H,3,12-13,15,18-19H2,1-2H3,(H,37,41)/t27-,29+/m0/s1
InChI key	MSHYGGHZTGSTOG-LMSSTIIKSA-N

Links

Hide

BindingDB	Searches for more than 90% similar small molecules in BindingDB, a public database of measured binding affinities of drug-like molecules with protein drug-targets
ChEBI	Searches ChEBI, a freely available dictionary of molecular entities that incorporates an ontological classification
ChemSpider	Searches ChemSpider, a free access service providing a structure centric community for chemists
CSLS	Searches the Chemical Structure Lookup Service (CSLS), meant to work as an address book for chemical structures
eMolecules	Searches eMolecules providing suppliers and information for chemicals
HIC-Up	A freely accessible resource for structural biologists who are dealing dealing with hetero-compounds ("small molecules")
KEGG COMPOUND	Searches KEGG COMPOUND for chemical substances and reactions that are relevant to life
Ligand Expo	An RCSB PDB resource for searching, exploring, and downloading information and coordinates about the chemical components found in the PDB
PDBeChem	Dictionary of chemical components in the PDB
PubChem	Searches PubChem, a component of NIH's Molecular Libraries Roadmap Initiative with information on the biological activities of small molecules
SuperLigands	An encyclopedia dedicated to a ligand oriented view that integrates different information about drug-likeness or binding properties
SuperHapten	Searches for similar small molecules in SuperHapten, an immunogenic compound database

Ligand Image

Large image - View atom labels

Instances in PDB Entries Hide

As free ligands: 1 entries
Ex: 2VNN
Related Ligands in the PDB Hide

Find stereoisomers

Find similar ligands

Use CM7 for a chemical structure search

Chemical Details

Hide

Formal Charge	0
Atom Count	79
Chiral Atom Count	2
Chiral Atoms	C22 C30
Bond Count	83
Aromatic Bond Count	22

The RCSB PDB (citation) is managed by two members of the
Research Collaboratory for Structural Bioinformatics:

RCSB PDB is a member of the

The RCSB PDB is funded by a grant from the National Science Foundation, the National Institutes of Health, and the US Department of Energy.

Prepare Data

Validate Data

Deposit Data

wwPDB Deposition & Annotation System

Legacy Deposition

Deposition Help & Resources

An Information Portal to 106082 Biological Macromolecular Structures