YTHDC1 - YTH domain containing 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q96MU7  HGNC Approved Gene Symbol: YTHDC1 
Ensembl ENSG00000083896 
Synonyms : YT521, KIAA1966, YT521-B
HgncId : HGNC:30626  Omim: 617283 
Refseq: NM_133370  GenBank: AK098515 
 
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

YTHDC1 Gene Structure

Chromosome: chr4_ctg9_hap1
Genbank ID: NM_133370 Orientation: -
Length coding sequence : 2127 nucleotides.
Regionstartendregion lengthphase at end
UTR
45,39445,746
Exon45,36645,393281
Exon33,92334,0241021
Exon33,21233,5403290
Exon32,66733,0904241
Exon28,94829,037901
Exon27,74327,837950
Exon25,84225,9501091
Exon25,64225,7591182
Exon19,77919,863850
Exon18,38918,5551672
Exon15,76315,845831
Exon14,46614,502372
Exon14,33014,369400
Exon14,15914,221630
Exon11,95412,0881350
Exon9,7399,9632250
UTR
6,0279,738